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LOCUS AY370101 556 bp DNA linear VRL 02-DEC-2005
DEFINITION HIV-1 isolate 11393R from Spain pol protein (pol) gene, partial cds
ACCESSION AY370101
VERSION AY370101.1 GI:34559000
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 556)
Show all sequences for reference 1
AUTHORS Chakraborty,B., Valer,L., de Mendoza,C., Soriano,V. and
Quinones-Mateu,M.E.
TITLE Failure to detect human immunodeficiency virus type 1
superinfection in 28 HIV-seroconcordant individuals with high risk
of reexposure to the virus
JOURNAL AIDS Res. Hum. Retroviruses 20 (9), 1026-1031 (2004)
PUBMED 15585092
REFERENCE 2 (bases 1 to 556)
Show all sequences for reference 2
AUTHORS Chakraborty,B., Valer,L., Tadele,M., Kiser,P., de Mendoza,C.,
Rangel,H.R., Weber,J., Mirza,M., Marotta,M.L., Stoddart,C.A.,
Soriano,V. and Quinines-Mateu,M.E.
TITLE Failure to Detect HIV-1 Superinfection in HIV-seroconcordant
individuals with High Risk of Re-exposure to the Virus. Is Fitness
Playing a Role in In Vivo HIV-1 Superinfection?
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 556)
Show all sequences for reference 3
AUTHORS Chakraborty,B., Valer,L., Tadele,M., Kiser,P., de Mendoza,C.,
Rangel,H.R., Weber,J., Mirza,M., Marotta,M.L., Stoddart,C.A.,
Soriano,V. and Quinines-Mateu,M.E.
TITLE Direct Submission
JOURNAL Submitted (18-AUG-2003) Service of Infectious Diseases, Hospital
Carlos III, Sinesio Delgado 10, Madrid 28029, Spain
REFERENCE 4
Show all sequences for reference 4
AUTHORS Chakraborty,B., Kiser,P., Rangel,H.R., Weber,J., Mirza,M.,
Marotta,M.L., Asaad,R., Rodriguez,B., Valdez,H., Lederman,M.M. and
Quinones-Mateu,M.E.
TITLE Can HIV-1 superinfection compromise antiretroviral therapy?
JOURNAL AIDS 18 (1), 132-134 (2004)
PUBMED 15090842
FEATURES Location/Qualifiers
source 1..556
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="11393R"
/isolation_source="patient"
/db_xref="taxon:11676"
/country="Spain"
/note="subtype: B"
gene <1..>556
/gene="pol"
CDS <1..>556
/gene="pol"
/note="contains RT and protease"
/codon_start="3"
/transl_table="1"
/product="pol protein"
/protein_id="AAQ75264.1"
/db_xref="GI:34559001"
/translation="KALVEICTELEKEGKISKIGPENPYNTPXFAIKKKBSTRWRKLV
DFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTXP
STNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVIYQYMDDLYVGS
DLEIEQHRTKXEELRQLWRWGFYTP"
BASE COUNT 218 a 84 c 110 g 133 t 11 other
ORIGIN
1 taaaagcatt agtagaaatt tgtacagaay tggaaaagga aggaaaaatt tcaaaaattg
61 ggcctgaaaa tccatacaat actccartat ttgccataaa gaaaaagrac agtactagat
121 ggagaaaatt agtagatttc agrgaactta ataagagaac tcaagactty tgggaagttc
181 aattaggaat accacatcct gcaggkttaa aaaagaaaaa atcagttaca gtactggatg
241 tgggtgatgc atatttttca gttcccttag ataaagaatt caggaartat actgcattta
301 ccrtacctag cactaacaat gagacaccag ggattagata tcagtacaat gtgcttccac
361 agggatggaa aggatcacca gcaatattcc aaagtagcat gacaaaaatt ytagagcctt
421 ttagaaagca aaacccagag atggttatct atcaatacat ggatgatttg tatgtaggat
481 ccgacttaga aatagagcag catagaacaa aartagagga actaagacaa ctgtggagrt
541 ggggatttta cacacc
//
last modified: Tue May 31 10:56 2022