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LOCUS AY365532 1497 bp RNA linear VRL 06-DEC-2005
DEFINITION HIV-1 isolate 96510 from Argentina pol protein (pol) gene, partial
cds
ACCESSION AY365532
VERSION AY365532.1 GI:42716907
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1497)
Show all sequences for reference 1
AUTHORS Gomez-Carrillo,M., Quarleri,J.F., Rubio,A.E., Carobene,M.G.,
Dilernia,D., Carr,J.K. and Salomon,H.
TITLE Drug Resistance Testing Provides Evidence of the Globalization of
HIV Type 1: A New Circulating Recombinant Form
JOURNAL AIDS Res. Hum. Retroviruses 20 (8), 885-888 (2004)
PUBMED 15320992
REFERENCE 2 (bases 1 to 1497)
Show all sequences for reference 2
AUTHORS Quarleri,J.F., Rubio,A., Carobene,M., Turk,G., Vignoles,M.,
Harrigan,R.P., Montaner,J.S., Salomon,H. and Gomez-Carrillo,M.
TITLE HIV type 1 BF recombinant strains exhibit different pol gene mosaic
patterns: descriptive analysis from 284 patients under treatment
failure
JOURNAL AIDS Res. Hum. Retroviruses 20 (10), 1100-1107 (2004)
PUBMED 15585101
REFERENCE 3 (bases 1 to 1497)
Show all sequences for reference 3
AUTHORS Rubio,A.E., Salomon,H.E., Gomez Carrillo,M., Carobene,M.G. and
Quarleri,J.F.
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2003) Department of Microbiology, Immunology and
Parasitology, National Reference Center for AIDS, School of
Medicine, University of Buenos Aires, Paraguay 2155 piso 11, Buenos
Aires C1121ABG, Argentina
FEATURES Location/Qualifiers
source 1..1497
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="96510"
/db_xref="taxon:11676"
/country="Argentina"
gene <1..>1497
/gene="pol"
CDS <1..>1497
/gene="pol"
/note="encodes for protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS37908.1"
/db_xref="GI:42716908"
/translation="PQITLWQRPLVTVKVGGXLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKAVGTVLIGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKIKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLTDFRELNKRTQDFWEVQLGIPHPAGIKKXKSVXVLDVGDAYFSVP
LDKEFRKYTAFTIPSTXNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIEQHRTKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIMLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVV
PLTRDAELELEENREILKEPVHGVYYDPSKDLIAEIQXQGLGQWTYQIYQEPFKNLKT
GKYARMRGTHTNDXKQLTEAVQKISTESIVIWGKIPKFRLPIQKETWEA"
BASE COUNT 596 a 250 c 312 g 331 t 8 other
ORIGIN
1 cctcagatca ctctttggca acgacccctt gtcacagtaa aggtaggggg gcamctaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccca tagaaatttg cgggcataaa gctgtaggta cagtcttaat aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagcttg gctgtacttt aaatttcccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg tccaaagatt
361 aaacaatggc cattgacaga agaaaarata aaagcattag tagaaatatg tacagaaatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattaa cagatttcag agaacttaat
541 aagagaactc aagatttctg ggaagttcaa ctagggatac cacatcctgc agggataaaa
601 aagamcaaat cagtamcagt actggatgtg ggtgatgcat atttttcagt tcccttagac
661 aaagaattca ggaagtatac tgcatttact atacctagta caamcaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagagcagca tagaacaaaa
901 gtagaggaac tgagacaaca tctgttgaag tggggattta ccacaccaga caaaaaacat
961 cagaargaac ctccattcct ttggatgggc tatgaactcc atcctgataa atggacagtg
1021 cagcctataa tgctgccaga aaaggacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaactga attgggcaag tcagatttat ccagggatta aagtaaggca attatgtaaa
1141 ctccttaggg gaaccaaagc actaacagaa gtagtaccac taacaagaga cgcagagcta
1201 gaactggagg aaaacagaga aattctaaaa gaaccagtac atggagtgta ttatgaccca
1261 tcaaaagact taatagcaga aatacagaam caggggctag gccaatggac atatcaaatt
1321 tatcaagagc catttaaaaa tctaaaaaca ggaaagtatg caagaatgag gggtacccac
1381 accaatgatr taaaacaatt aacagaggca gtgcaaaaaa tatccacaga aagcatagta
1441 atatggggaa agattcctaa atttagatta cccatacaaa aagaaacatg ggaagca
//
last modified: Tue May 31 10:56 2022