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LOCUS AY351748 969 bp RNA linear VRL 03-JUN-2005
DEFINITION HIV-1 isolate 3999-7303_1 from USA reverse transcriptase (pol)
gene, partial cds
ACCESSION AY351748
VERSION AY351748.1 GI:33439619
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 969)
Show all sequences for reference 1
AUTHORS Gonzales,M.J., Johnson,E., Dupnik,K.M., Imamichi,T. and Shafer,R.W.
TITLE Colinearity of reverse transcriptase inhibitor resistance mutations
detected by population-based sequencing
JOURNAL J. Acquir. Immune Defic. Syndr. 34 (4), 398-402 (2003)
PUBMED 14615657
REFERENCE 2 (bases 1 to 969)
Show all sequences for reference 2
AUTHORS Gonzales,M.J., Johnston,E., Dupnik,K.M., Imamichi,T. and
Shafer,R.W.
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2003) Medicine-Division of Infectious Diseases,
Stanford University, 300 Pasteur Drive, Grant Building Room S-156,
Palo Alto, CA 94305-5107, USA
FEATURES Location/Qualifiers
source 1..969
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="3999-7303_1"
/db_xref="taxon:11676"
/country="USA"
gene <1..>969
/gene="pol"
CDS <1..>969
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAQ18856.1"
/db_xref="GI:33439620"
/translation="PISPIETVPVKLKPGMDGPKVKQWPLTEEKVKALVEICAELEQD
GKISKIGPENPYNTPVFAIKKKNSDKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKK
NKSVTVLDVGDAYFSIPLDEDFRKYTAFTIPSVNNQTPGIRYQYNVLPQGWKGSPAIF
QCSMTKILEPFRKQNPDIVIDQYMDDLYVGSDLEIEQHRTKIKELREYLWKWGFYTPD
KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKV
KHLCKLLRGAKALTEVISLTEEAELELAENREILKEPVHGVYYDPSK"
BASE COUNT 382 a 161 c 206 g 220 t
ORIGIN
1 cccattagtc ctattgagac tgtaccagta aaattaaagc caggaatgga tggcccaaaa
61 gttaaacaat ggccattgac agaagaaaaa gtaaaagcat tagtagagat ttgtgcagaa
121 ctggaacagg acgggaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta
181 tttgccataa agaagaaaaa cagtgataaa tggagaaaat tagtagattt cagagaactt
241 aataaaagaa ctcaagattt ctgggaagtt caactaggaa taccacatcc ctcagggtta
301 aaaaagaaca aatcagtaac agtactggat gtgggtgatg catatttttc aattccctta
361 gatgaagact tcaggaagta tactgcattt accataccta gtgtaaacaa tcagacacca
421 gggattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc
481 caatgcagca tgacaaaaat cttagagcct tttagaaaac aaaatccaga catagttatc
541 gatcaataca tggatgatct gtatgtagga tcggacttag agatagagca gcatagaaca
601 aaaataaagg aactgagaga atatctgtgg aagtgggggt tttacacacc agacaagaag
661 catcagaaag aacctccatt cctttggatg ggttatgaac ttcatcctga taaatggaca
721 gtacagccta tagtactgcc agagaaagac agttggactg tcaatgacat acaaaagtta
781 gtgggaaaat tgaattgggc aagtcaaatt tatgcaggga ttaaagtaaa gcacttatgt
841 aaactcctta ggggagccaa agcactaaca gaagtaatat cactaacaga agaagcagag
901 ctagaactgg cagaaaacag agagattcta aaagaaccag tacatggagt gtattatgac
961 ccatcaaag
//
last modified: Tue May 31 10:56 2022