HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AY288887		     485 bp    DNA     linear	VRL 02-FEB-2004
DEFINITION  HIV-1 isolate 00HN.s10 from China gag protein (gag) gene, partial
	    cds
ACCESSION   AY288887
VERSION     AY288887.1 GI:34305406
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 485)
            Show all sequences for reference 1
  AUTHORS   Su,B., Liu,L., Wang,F., Gui,X., Zhao,M., Tien,P., Zhang,L. and
	    Chen,Z.
  TITLE     HIV-1 subtype B' dictates the AIDS epidemic among paid blood donors
	    in the Henan and Hubei provinces of China
  JOURNAL   AIDS 17 (17), 2515-2520 (2003)
  PUBMED    14600524
REFERENCE   2 (bases 1 to 485)
            Show all sequences for reference 2
  AUTHORS   Su,B., Liu,L., Wang,F., Gui,X., Zhao,M., Tien,P., Zhang,L. and
	    Chen,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2003) Modern Virology Research Center, College of
	    Life Sciences, Wuhan University, Wuhan, Hubei 430072, P.R. China
FEATURES             Location/Qualifiers
     source	     1..485
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="00HN.s10"
		     /db_xref="taxon:11676"
		     /country="China: Henan"
     gene	     1..>485
		     /gene="gag"
     CDS	     1..>485
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AAQ63537.1"
		     /db_xref="GI:34305407"
		     /translation="MGARASVLSGGQLDRWEKIRLRPGGKKKYRLKHLVWASRELERF
		     AVNPGLLESSEGCRQILEQLQPALKTGSEELRSLFNTVATLYCVHQRIEIKDTKEALE
		     KIEEEQNKSKKKAQQTAADIGNNSQVSQNYPIVQNLQGQMVHQPISPRTLNAWVKVVE
		     E"
BASE COUNT	195 a	  85 c	  117 g     88 t
ORIGIN
       1 atgggtgcga gagcgtcagt attaagcggg ggacaattag atagatggga aaaaattcgg 
      61 ttaaggccag ggggaaagaa aaaatataga ttaaaacatc tagtatgggc aagcagggag 
     121 ctagaacgat tcgcagttaa tcctggcctg ttagaatcat cagaaggctg tagacaaata 
     181 ctggaacagc tacaaccagc ccttaagaca ggatcagaag aacttagatc attattcaat 
     241 acagtagcaa ccctctattg tgtgcatcaa aggatagaga taaaagacac caaggaagct 
     301 ttagagaaga tagaggaaga gcaaaacaaa agtaagaaaa aggcacagca aacagcagct 
     361 gacataggaa acaacagcca ggtcagccaa aattacccta tagtgcaaaa cctccagggg 
     421 caaatggtac atcagcccat atcacctaga actttaaatg catgggtaaa agtagtagaa 
     481 gagaa
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health