View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AY275805 571 bp RNA linear VRL 30-APR-2004
DEFINITION HIV-1 isolate 151RT from Brazil reverse transcriptase (pol) gene,
partial cds
ACCESSION AY275805
VERSION AY275805.1 GI:34595935
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 571)
Show all sequences for reference 1
AUTHORS Soares,E.A., Santos,R.P., Pellegrini,J.A., Sprinz,E., Tanuri,A. and
Soares,M.A.
TITLE Epidemiologic and molecular characterization of human
immunodeficiency virus type 1 in southern Brazil.
JOURNAL J. Acquir. Immune Defic. Syndr. 34 (5), 520-6 (2003)
PUBMED 14657764
REFERENCE 2 (bases 1 to 571)
Show all sequences for reference 2
AUTHORS Soares,E.A.J.M., Santos,R.P., Pellegrini,J.A., Sprinz,E., Tanuri,A.
and Soares,M.A.
TITLE Direct Submission
JOURNAL Submitted (15-APR-2003) Genetica, Universidade Federal do Rio de
Janeiro, CCS Bloco A - sala A2-121 - Cidade Universitaria - Ilha do
Fundao, Rio de Janeiro, RJ 21944-970, Brazil
REFERENCE 3
Show all sequences for reference 3
AUTHORS Santos,A.F., Sousa,T.M., Soares,E.A., Sanabani,S., Martinez,A.M.,
Sprinz,E., Silveira,J., Sabino,E.C., Tanuri,A. and Soares,M.A.
TITLE Characterization of a new circulating recombinant form comprising
HIV-1 subtypes C and B in southern Brazil
JOURNAL AIDS 20 (16), 2011-2019 (2006)
PUBMED 17053347
REFERENCE 4
Show all sequences for reference 4
AUTHORS Soares,E.A.J.M., Santos,A.F.A., Sousa,T.M., Sprinz,E.,
Martinez,A.M.B., Silveira,J., Tanuri,A. and Soares,M.A.
TITLE Differential drug resistance acquisition in HIV-1 of subtypes B and
C.
JOURNAL PLoS. ONE.. 2(1); e730 (2007)
PUBMED 17710130
FEATURES Location/Qualifiers
source 1..571
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="151RT"
/isolation_source="patient 151"
/db_xref="taxon:11676"
/country="Brazil"
gene <1..>571
/gene="pol"
CDS <1..>571
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAQ76689.1"
/db_xref="GI:34595936"
/translation="EICTEMEKEGKISKIGPENPYNTPVFAIKRKDGTTWRKLVDFRE
LNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSTNN
ETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDLIICQYVDDLYVGSDLEI
EQHRAKIEELRRHLLRWGLTTPDKKYQKEP"
BASE COUNT 228 a 91 c 117 g 135 t
ORIGIN
1 gaaatttgta cagaaatgga aaaggaaggg aaaatttcaa aaattgggcc tgaaaatcca
61 tacaatactc cagtatttgc tataaagaga aaggacggta ctacatggag aaaattagta
121 gattttagag agcttaataa gagaactcaa gacttctggg aagttcaatt aggaatacca
181 catcccgcag ggttaaaaaa gaacaaatca gtaacagtat tggatgtggg tgatgcatat
241 ttttcagttc ctttagataa agaattcagg aagtatactg catttaccat acctagtaca
301 aacaatgaaa caccagggat tagatatcag tacaatgtgc ttccacaagg atggaaagga
361 tcaccagcaa tattccaaag cagtatgaca aaaatcttag aaccttttag aaaacaaaat
421 ccagacctaa ttatctgtca atacgtggat gacttgtatg taggatctga cttagaaata
481 gagcagcata gagcaaaaat agaggaactg agacgacatc tgttgaggtg ggggttaacc
541 acaccagaca aaaaatatca gaaagaacct c
//
last modified: Tue May 31 10:56 2022