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LOCUS AY156818 763 bp DNA linear VRL 22-OCT-2002
DEFINITION HIV-1 clone P11 from USA envelope glycoprotein (env) gene, partial
cds
ACCESSION AY156818
VERSION AY156818.1 GI:24210105
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 763)
Show all sequences for reference 1
AUTHORS Metzker,M.L., Mindell,D.P., Liu,X.M., Ptak,R.G., Gibbs,R.A. and
Hillis,D.M.
TITLE Molecular evidence of HIV-1 transmission in a criminal case.
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14292-7 (2002)
PUBMED 12388776
REFERENCE 2 (bases 1 to 763)
Show all sequences for reference 2
AUTHORS Metzker,M.L., Liu,X.-M. and Gibbs,R.A.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2002) Department of Molecular & Human Genetics,
Baylor College of Medicine, One Baylor Plaza, N1409, Houston, TX
77030, USA
COMMENT There are 174 sequences in this group. A control group comprised of
28 individuals includes 26 env and 25 RT sequences taken in 1995.
Patient samples (66) include 51 env and 7 RT from 1995
(BCM,P01-50), 2 env and 6 RT from 1997 (MIC). Victim samples (57)
include 51 env and 2RT from 1995 (BCM,V01-50), and 2 env and 2 RT
from 1997 (MIC). This was a criminal case where a physician
intentionally infected the "victim" by intramuscular injection of
blood from the "patient". Victim was injected August, 1994 and
was seropositive in January, 1995.
FEATURES Location/Qualifiers
source 1..763
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolation_source="whole blood PBMC"
/db_xref="taxon:11676"
/clone="P11"
/country="USA: Lafayette, LA"
gene <1..>763
/gene="env"
CDS <1..>763
/gene="env"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAN41545.1"
/db_xref="GI:24210106"
/translation="IRPTVSTQLLLNGSLAEEEVVIRSENFTNNAKTIIVQLKEPVEI
NCTRPNNNTRKRITTGPGRVLYTTGEIIGNIRKAYCNISKAKWNNTLGQIAEKLREQF
NKTIIFNQSSGGDPEIVMHSFNCGGEFFYCNTSQLFNSTWNSTKKENNTTGDTIITLP
CKIKQIINMWQEVGKAMYAPPIQGIIRCSSNVTGLLLTRDGGENNATNETFRPGGGNM
RDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKR"
BASE COUNT 331 a 120 c 151 g 161 t
ORIGIN
1 aattaggcca acagtatcaa ctcaattact gctaaatggc agtctagcag aagaagaggt
61 agtaattaga tctgaaaatt tcacgaacaa tgctaaaacc ataatagtac agctgaaaga
121 acctgtagaa attaattgta caagacccaa caacaataca agaaaaagga taactacagg
181 accagggaga gtactttaca caacaggaga aataatagga aatataagaa aagcatattg
241 taacattagt aaagcaaaat ggaataacac tctaggacag atagctgaaa aattaagaga
301 acaatttaat aaaacaataa tctttaatca atcctcagga ggggacccag aaattgtaat
361 gcacagtttt aactgtggag gggaattttt ctactgtaat acatcacaac tgtttaatag
421 tacctggaat agtactaaaa aagaaaataa cacgacagga gataccataa tcacactccc
481 atgcaaaata aaacaaatta taaacatgtg gcaggaggta ggaaaagcaa tgtatgcccc
541 tcccatccaa ggaataatta gatgctcatc aaatgttaca gggctactac taacaagaga
601 tggtggtgag aacaacgcta ctaatgagac cttcagacct ggaggaggaa atatgaggga
661 caattggaga agtgaattat ataaatataa agtagtaaaa attgaaccat taggagtagc
721 acccaccaag gcaaagagaa gggtggtgca aagagaaaaa aga
//
last modified: Tue May 31 10:56 2022