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LOCUS AY140622 1099 bp DNA linear VRL 11-APR-2005
DEFINITION HIV-1 isolate 97CIRMF15 from Gabon pol protein (pol) gene, partial
cds
ACCESSION AY140622
VERSION AY140622.1 GI:24062003
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1099)
Show all sequences for reference 1
AUTHORS Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
TITLE Analysis of partial pol and env sequences indicates a high
prevalence of HIV type 1 recombinant strains circulating in Gabon
JOURNAL AIDS Res. Hum. Retroviruses 18 (15), 1103-1116 (2002)
PUBMED 12396449
REFERENCE 2 (bases 1 to 1099)
Show all sequences for reference 2
AUTHORS Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2002) Centre International de Recherches
Medicales, Laboratoire de Retrovirologie, Franceville, Gabon
FEATURES Location/Qualifiers
source 1..1099
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="97CIRMF15"
/db_xref="taxon:11676"
/country="Gabon"
gene <1..>1099
/gene="pol"
CDS <1..>1099
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAN39637.1"
/db_xref="GI:24062004"
/translation="LRVWGGDKTLSETGAEGQRQGIVSFSFPQITLWQRPVVTVRVGG
QLKEALLDTGADDTVLEELSLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTV
LVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKAL
PEFCAEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQL
GIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSVNNETPGVRYQYNVLP
QGWKGSPAIFQSSMTKILEPFRKQNPELVIYQYMDDLYVGSDLDIGQHRTKIEELRDH
LLKWGFTTPDKKHQKEPPFLWMGYGLHPDKWT"
BASE COUNT 417 a 173 c 240 g 269 t
ORIGIN
1 cttcgggttt ggggaggaga taaaaccctc tcagaaacag gagcagaagg acaaagacaa
61 ggaattgtat cctttagctt ccctcaaatc actctttggc aacgacccgt tgtcacagta
121 agagtaggag ggcagctaaa agaagctcta ttagacacag gagcagatga tacagtatta
181 gaagaactaa gtttgccagg aaaatggaaa ccaaaaatga tagggggaat tggaggtttt
241 atcaaagtaa gacagtatga tcagatactt atagaaattt gtggaaaaaa ggctataggt
301 acagtattgg taggacctac acctgtcaac ataattggac gaaatatgtt gactcagatt
361 ggttgtactt taaattttcc aattagtcct attgaaactg taccagtaaa attaaagcca
421 ggaatggatg gcccaaaggt caaacaatgg ccattgacag aagaaaaaat aaaagcatta
481 ccagaatttt gtgcagaaat ggaaaaggaa ggaaaaattt caaaaattgg gcctgaaaat
541 ccatacaata ctccaatatt tgccataaag aaaaaagata gtactaagtg gagaaaatta
601 gtagatttca gagaacttaa taagagaact caagattttt gggaagttca attaggaata
661 ccacatcctg ctgggttgaa gaagaaaaaa tcagtaacag tattggatgt gggggatgca
721 tatttttcag tccctttata tgaagatttc aggaagtaca ctgcattcac tatacctagt
781 gttaataatg agacaccagg ggttagatat cagtacaatg tgcttccaca gggatggaaa
841 ggatcaccag caatattcca aagtagcatg acaaaaatct tagagccctt tagaaagcag
901 aatccagaat tagttatata ccaatacatg gatgatttgt atgtagggtc tgatttagac
961 ataggacaac atagaacaaa aatagaggag ctaagagatc atctattgaa gtggggattt
1021 accacaccag acaaaaaaca tcagaaagaa cccccatttc tttggatggg gtatggactc
1081 catcctgaca aatggacag
//
last modified: Tue May 31 10:56 2022