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LOCUS	    AY140622		    1099 bp    DNA     linear	VRL 11-APR-2005
DEFINITION  HIV-1 isolate 97CIRMF15 from Gabon pol protein (pol) gene, partial
	    cds
ACCESSION   AY140622
VERSION     AY140622.1 GI:24062003
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1099)
            Show all sequences for reference 1
  AUTHORS   Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
	    Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
  TITLE     Analysis of partial pol and env sequences indicates a high
	    prevalence of HIV type 1 recombinant strains circulating in Gabon
  JOURNAL   AIDS Res. Hum. Retroviruses 18 (15), 1103-1116 (2002)
  PUBMED    12396449
REFERENCE   2 (bases 1 to 1099)
            Show all sequences for reference 2
  AUTHORS   Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
	    Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-AUG-2002) Centre International de Recherches
	    Medicales, Laboratoire de Retrovirologie, Franceville, Gabon
FEATURES             Location/Qualifiers
     source	     1..1099
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="97CIRMF15"
		     /db_xref="taxon:11676"
		     /country="Gabon"
     gene	     <1..>1099
		     /gene="pol"
     CDS	     <1..>1099
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAN39637.1"
		     /db_xref="GI:24062004"
		     /translation="LRVWGGDKTLSETGAEGQRQGIVSFSFPQITLWQRPVVTVRVGG
		     QLKEALLDTGADDTVLEELSLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTV
		     LVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKAL
		     PEFCAEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQL
		     GIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSVNNETPGVRYQYNVLP
		     QGWKGSPAIFQSSMTKILEPFRKQNPELVIYQYMDDLYVGSDLDIGQHRTKIEELRDH
		     LLKWGFTTPDKKHQKEPPFLWMGYGLHPDKWT"
BASE COUNT	417 a	 173 c	  240 g    269 t
ORIGIN
       1 cttcgggttt ggggaggaga taaaaccctc tcagaaacag gagcagaagg acaaagacaa 
      61 ggaattgtat cctttagctt ccctcaaatc actctttggc aacgacccgt tgtcacagta 
     121 agagtaggag ggcagctaaa agaagctcta ttagacacag gagcagatga tacagtatta 
     181 gaagaactaa gtttgccagg aaaatggaaa ccaaaaatga tagggggaat tggaggtttt 
     241 atcaaagtaa gacagtatga tcagatactt atagaaattt gtggaaaaaa ggctataggt 
     301 acagtattgg taggacctac acctgtcaac ataattggac gaaatatgtt gactcagatt 
     361 ggttgtactt taaattttcc aattagtcct attgaaactg taccagtaaa attaaagcca 
     421 ggaatggatg gcccaaaggt caaacaatgg ccattgacag aagaaaaaat aaaagcatta 
     481 ccagaatttt gtgcagaaat ggaaaaggaa ggaaaaattt caaaaattgg gcctgaaaat 
     541 ccatacaata ctccaatatt tgccataaag aaaaaagata gtactaagtg gagaaaatta 
     601 gtagatttca gagaacttaa taagagaact caagattttt gggaagttca attaggaata 
     661 ccacatcctg ctgggttgaa gaagaaaaaa tcagtaacag tattggatgt gggggatgca 
     721 tatttttcag tccctttata tgaagatttc aggaagtaca ctgcattcac tatacctagt 
     781 gttaataatg agacaccagg ggttagatat cagtacaatg tgcttccaca gggatggaaa 
     841 ggatcaccag caatattcca aagtagcatg acaaaaatct tagagccctt tagaaagcag 
     901 aatccagaat tagttatata ccaatacatg gatgatttgt atgtagggtc tgatttagac 
     961 ataggacaac atagaacaaa aatagaggag ctaagagatc atctattgaa gtggggattt 
    1021 accacaccag acaaaaaaca tcagaaagaa cccccatttc tttggatggg gtatggactc 
    1081 catcctgaca aatggacag
//
last modified: Tue May 31 10:56 2022


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