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LOCUS AY140613 1099 bp DNA linear VRL 11-APR-2005
DEFINITION HIV-1 isolate 97CIRMF26 from Gabon pol protein (pol) gene, partial
cds
ACCESSION AY140613
VERSION AY140613.1 GI:24061985
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1099)
Show all sequences for reference 1
AUTHORS Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
TITLE Analysis of partial pol and env sequences indicates a high
prevalence of HIV type 1 recombinant strains circulating in Gabon
JOURNAL AIDS Res. Hum. Retroviruses 18 (15), 1103-1116 (2002)
PUBMED 12396449
REFERENCE 2 (bases 1 to 1099)
Show all sequences for reference 2
AUTHORS Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2002) Centre International de Recherches
Medicales, Laboratoire de Retrovirologie, Franceville, Gabon
FEATURES Location/Qualifiers
source 1..1099
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="97CIRMF26"
/db_xref="taxon:11676"
/country="Gabon"
gene <1..>1099
/gene="pol"
CDS <1..>1099
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAN39628.1"
/db_xref="GI:24061986"
/translation="LRVWGRDNPLSETGAEGQRQGTVSLSFPQITLWQRPLVTIKVGG
QLKEALLDTGADDTVLEDIKLPGKWTPKMIGGIGGFIKVKQYDQVLIEICGQKAIGTV
LVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKAL
TEICIEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQL
GIPHPAGLKKKKSVSVLDVGDAYFSIPLCEDFRKYTAFTIPSVNNETPGIRYQYNVLP
QGWKGSPAIFQSSMIKILEPFRKQNPEVVIYQYMDDLYVGSDLEIGQHRAKIEKLRQH
LLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT"
BASE COUNT 421 a 180 c 233 g 265 t
ORIGIN
1 cttcgggttt ggggaagaga taaccccctc tcagaaacag gagcagaagg acaaagacaa
61 ggaactgtat cccttagctt ccctcaaatc actctttggc aacgacccct agtcacaata
121 aaggtagggg gacagctaaa agaagctcta ttagatacag gagcagatga tacagtatta
181 gaagacataa aattgccagg aaaatggaca ccaaaaatga tagggggaat tggaggtttt
241 atcaaagtaa aacagtatga tcaggtactt atagaaatct gtggacaaaa agctataggt
301 acagtattag taggacctac acctgtcaac ataattggta gaaatttgtt gacccagatt
361 ggctgcactc taaattttcc aattagtcct attgaaactg taccagtaaa attgaagcca
421 ggaatggatg gtccaaaagt taaacaatgg ccattgacag aagaaaaaat aaaagcgttg
481 acagaaattt gtatagaaat ggaaaaggaa ggaaaaattt caaaaattgg gcctgaaaat
541 ccatacaata ctccaatatt tgccataaag aaaaaagata gtactaagtg gagaaaatta
601 gtagacttca gagaacttaa taagagaact caagactttt gggaagttca attaggaata
661 ccacatcctg cagggttaaa aaagaaaaaa tcagtttcag tgctggatgt gggtgatgca
721 tatttttcca ttcccttatg tgaagatttt aggaagtata ctgcatttac catacctagt
781 gtaaacaatg agacaccagg gattagatat cagtacaatg tgcttccaca gggatggaaa
841 ggatcaccag cgatattcca aagtagcatg ataaaaatct tagagccctt tagaaagcaa
901 aatccagaag tagttatcta tcaatacatg gatgatttgt atgtaggatc tgatttagag
961 atagggcagc atagagcaaa aatagagaag ttaagacaac atctattgag gtggggactt
1021 accacaccag acaaaaaaca tcagaaagaa ccaccattcc tttggatggg ttatgaactc
1081 catcctgata aatggacag
//
last modified: Tue May 31 10:56 2022