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LOCUS	    AY140613		    1099 bp    DNA     linear	VRL 11-APR-2005
DEFINITION  HIV-1 isolate 97CIRMF26 from Gabon pol protein (pol) gene, partial
	    cds
ACCESSION   AY140613
VERSION     AY140613.1 GI:24061985
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1099)
            Show all sequences for reference 1
  AUTHORS   Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
	    Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
  TITLE     Analysis of partial pol and env sequences indicates a high
	    prevalence of HIV type 1 recombinant strains circulating in Gabon
  JOURNAL   AIDS Res. Hum. Retroviruses 18 (15), 1103-1116 (2002)
  PUBMED    12396449
REFERENCE   2 (bases 1 to 1099)
            Show all sequences for reference 2
  AUTHORS   Pandrea,I., Robertson,D.L., Onanga,R., Gao,F., Makuwa,M., Ngari,P.,
	    Bedjabaga,I., Roques,P., Simon,F. and Apetrei,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-AUG-2002) Centre International de Recherches
	    Medicales, Laboratoire de Retrovirologie, Franceville, Gabon
FEATURES             Location/Qualifiers
     source	     1..1099
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="97CIRMF26"
		     /db_xref="taxon:11676"
		     /country="Gabon"
     gene	     <1..>1099
		     /gene="pol"
     CDS	     <1..>1099
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAN39628.1"
		     /db_xref="GI:24061986"
		     /translation="LRVWGRDNPLSETGAEGQRQGTVSLSFPQITLWQRPLVTIKVGG
		     QLKEALLDTGADDTVLEDIKLPGKWTPKMIGGIGGFIKVKQYDQVLIEICGQKAIGTV
		     LVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKAL
		     TEICIEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQL
		     GIPHPAGLKKKKSVSVLDVGDAYFSIPLCEDFRKYTAFTIPSVNNETPGIRYQYNVLP
		     QGWKGSPAIFQSSMIKILEPFRKQNPEVVIYQYMDDLYVGSDLEIGQHRAKIEKLRQH
		     LLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT"
BASE COUNT	421 a	 180 c	  233 g    265 t
ORIGIN
       1 cttcgggttt ggggaagaga taaccccctc tcagaaacag gagcagaagg acaaagacaa 
      61 ggaactgtat cccttagctt ccctcaaatc actctttggc aacgacccct agtcacaata 
     121 aaggtagggg gacagctaaa agaagctcta ttagatacag gagcagatga tacagtatta 
     181 gaagacataa aattgccagg aaaatggaca ccaaaaatga tagggggaat tggaggtttt 
     241 atcaaagtaa aacagtatga tcaggtactt atagaaatct gtggacaaaa agctataggt 
     301 acagtattag taggacctac acctgtcaac ataattggta gaaatttgtt gacccagatt 
     361 ggctgcactc taaattttcc aattagtcct attgaaactg taccagtaaa attgaagcca 
     421 ggaatggatg gtccaaaagt taaacaatgg ccattgacag aagaaaaaat aaaagcgttg 
     481 acagaaattt gtatagaaat ggaaaaggaa ggaaaaattt caaaaattgg gcctgaaaat 
     541 ccatacaata ctccaatatt tgccataaag aaaaaagata gtactaagtg gagaaaatta 
     601 gtagacttca gagaacttaa taagagaact caagactttt gggaagttca attaggaata 
     661 ccacatcctg cagggttaaa aaagaaaaaa tcagtttcag tgctggatgt gggtgatgca 
     721 tatttttcca ttcccttatg tgaagatttt aggaagtata ctgcatttac catacctagt 
     781 gtaaacaatg agacaccagg gattagatat cagtacaatg tgcttccaca gggatggaaa 
     841 ggatcaccag cgatattcca aagtagcatg ataaaaatct tagagccctt tagaaagcaa 
     901 aatccagaag tagttatcta tcaatacatg gatgatttgt atgtaggatc tgatttagag 
     961 atagggcagc atagagcaaa aatagagaag ttaagacaac atctattgag gtggggactt 
    1021 accacaccag acaaaaaaca tcagaaagaa ccaccattcc tttggatggg ttatgaactc 
    1081 catcctgata aatggacag
//
last modified: Tue May 31 10:56 2022


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