View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AY122638 297 bp RNA linear VRL 13-MAR-2003
DEFINITION HIV-1 15.05.2001 from Switzerland protease (pol) gene, partial cds
ACCESSION AY122638
VERSION AY122638.1 GI:22204088
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Jost,S., Bernard,M.C., Kaiser,L., Yerly,S., Hirschel,B., Samri,A.,
Autran,B., Goh,L.E. and Perrin,L.
TITLE A patient with HIV-1 superinfection
JOURNAL N. Engl. J. Med. 347 (10), 731-736 (2002)
PUBMED 12213944
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Jost,S., Bernard,M.-C., Kaiser,L., Yerly,S., Hirschel,B., Goh,L.-E.
and Perrin,L.
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2002) Division of Infectious Diseases, Geneva
University Hospital, 24, Micheli-du-Crest, Geneva 14 1211,
Switzerland
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="15.05.2001"
/isolation_source="plasma"
/db_xref="taxon:11676"
/country="Switzerland"
/note="subtype: B"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAM92580.1"
/db_xref="GI:22204089"
/translation="PQITLWQRPLVAIKVGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT 102 a 49 c 72 g 74 t
ORIGIN
1 cctcaaatca ctctttggca acgacccctt gtcgcaataa aggtaggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccaggc
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 caaatactca tagaaatctg cgggcataag gctataggta cagtgttagt agggcctaca
241 cctgtcaaca taattggaag gaatctgttg actcagattg gctgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022