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LOCUS	    AM696242		     537 bp    RNA     linear	VRL 29-OCT-2007
DEFINITION  Simian immunodeficiency virus partial env gene for envelope
	    glycoprotein V2-V5 region, genomic RNA, isolate SIVcpzMB788
ACCESSION   AM696242
VERSION     AM696242.1 GI:158935226
KEYWORDS    env gene; envelope glycoprotein; gp120.
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Van Heuverswyn,F., Heuverswyn,F.V., Li,Y., Bailes,E., Neel,C.,
	    Lafay,B., Keele,B.F., Shaw,K.S., Takehisa,J., Kraus,M.H., Loul,S.,
	    Butel,C., Liegeois,F., Yangda,B., Sharp,P.M., Mpoudi-Ngole,E.,
	    Delaporte,E., Hahn,B.H. and Peeters,M.
  TITLE     Genetic diversity and phylogeographic clustering of SIVcpzPtt in
	    wild chimpanzees in Cameroon
  JOURNAL   Virology 368 (1), 155-171 (2007)
  PUBMED    17651775
REFERENCE   2 (bases 1 to 537)
            Show all sequences for reference 2
  AUTHORS   Van Heuverswyn,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-APR-2007) Van Heuverswyn F., UMR145, I.R.D., 911
	    Avenue Agropolis, 34394 Montpellier Cedex 5, FRANCE
FEATURES             Location/Qualifiers
     source	     1..537
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /isolate="SIVcpzMB788"
		     /isolation_source="fecal matter"
		     /host="Pan troglodytes troglodytes (wild)"
		     /db_xref="taxon:11723"
		     /country="Cameroon"
     gene	     <1..>537
		     /gene="env"
     CDS	     <1..>537
		     /gene="env"
		     /note="V2-V5 region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="CAM90452.1"
		     /db_xref="GI:158935227"
		     /translation="LRCNDVNFTGSGSCNNVSSVQCTHGIRPVVTTQLLLNGSLSKGD
		     IMVRVKNKTDNVNTHIVQLKESILIHCIRVGNKTVKGIPIGPGQHFYSTETIVEDTRK
		     AHCNISKTRWEAMLMKVADNLANLYNTTNIAFLPSSGGDPEITTHSFNCGGEFFYCNT
		     SALFNTSLAELNKTRGNNH"
BASE COUNT	197 a	  92 c	  107 g    141 t
ORIGIN
       1 ttgagatgta atgatgtaaa cttcactgga tcaggttcat gcaacaatgt ttcgtcagta 
      61 caatgtacac atggaatcag accagttgtt acaactcagt tgcttctaaa tggtagtcta 
     121 tcaaaaggtg acataatggt tagagttaag aacaaaacag ataatgttaa cacacacata 
     181 gtacagttaa aagaaagtat attaattcac tgtattaggg taggtaacaa gacagttaag 
     241 ggtattccca tagggccagg tcaacatttc tacagtacag aaactatagt agaagataca 
     301 agaaaagctc attgtaacat tagtaaaaca agatgggagg caatgttaat gaaagtggct 
     361 gacaatttgg ctaacttgta caacacaaca aacatagcct ttctaccttc cagcggggga 
     421 gatccagaga taacaacgca ctcctttaat tgtggagggg aattctttta ttgcaacaca 
     481 tcagcattat ttaatacatc attggcagag ctcaataaaa ctcgggggaa caatcac
//
last modified: Tue May 31 10:56 2022


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