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LOCUS AM397303 548 bp DNA linear VRL 21-APR-2008
DEFINITION Simian immunodeficiency virus - mac proviral partial env gene for
extra-membrane envelope protein, V1-V2 part, clone 1_A05_28_6
ACCESSION AM397303
VERSION AM397303.1 GI:156447096
KEYWORDS env gene; extra-membrane envelope protein, V1-V2 part.
SOURCE Simian immunodeficiency virus - mac
ORGANISM Simian immunodeficiency virus - mac Viruses; Retro-transcribing
viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Primate
lentivirus group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Le Tortorec,A., Le Grand,R., Denis,H., Satie,A.P., Mannioui,K.,
Roques,P., Maillard,A., Daniels,S., Jegou,B. and
Dejucq-Rainsford,N.
TITLE Infection of semen-producing organs by SIV during the acute and
chronic stages of the disease
JOURNAL PLoS ONE 3 (3), E1792 (2008)
PUBMED 18347738
REFERENCE 2 (bases 1 to 548)
Show all sequences for reference 2
AUTHORS Roques,P.
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2006) Roques P., Service de neurovirologie, CEA,
18 route du Panorama, Fontenay aux Roses, 92265, FRANCE
FEATURES Location/Qualifiers
source 1..548
/organism="Simian immunodeficiency virus - mac"
/proviral="Simian immunodeficiency virus - mac"
/mol_type="genomic DNA"
/isolate="macaque 6350"
/host="Macaca fascicularis"
/db_xref="taxon:11711"
/clone="1_A05_28_6"
/tissue_type="prostate gland"
gene <1..>548
/gene="env"
CDS <1..>548
/gene="env"
/codon_start="3"
/transl_table="1"
/product="extra-membrane envelope protein, V1-V2 part"
/protein_id="CAL37171.1"
/db_xref="GI:156447097"
/db_xref="GOA:A7M877"
/db_xref="InterPro:IPR000777"
/db_xref="UniProtKB/TrEMBL:A7M877"
/translation="DNGDYSELALNVTESFDAWENTVTEQAIEDVWQLFETSIKPCVK
LSPLCITMRCNKSETDRWGLTKSSTTTPTTTTTTATPASITRTTSAEIVVNETSSCIT
HNNCTGLEQEQMISCKFNMTGLKRDKKKEYNETWYSTDLVCEQGNSNDNESRCYMNHC
NTSIIQESCDKHYWDTIRFRYC"
BASE COUNT 212 a 87 c 112 g 137 t
ORIGIN
1 cagataatgg tgattattca gaattggccc ttaatgttac agaaagcttt gatgcttggg
61 agaatacagt cacagagcag gcaatagagg atgtatggca actctttgag acctcaataa
121 agccttgtgt aaaattatcc ccattatgca ttactatgag atgcaataaa agtgagacag
181 atagatgggg attgacaaaa tcatcaacaa caacaccaac aacaacaaca acaacagcaa
241 caccagcatc aataacaagg acaacatcag cagaaatagt ggtcaatgag actagttctt
301 gtataactca taataattgc acaggtttgg aacaagagca aatgataagc tgtaagttca
361 acatgacagg gttaaaaagg gacaagaaaa aggagtacaa tgaaacttgg tactctacag
421 atttggtttg tgaacaaggg aatagcaatg ataatgaaag tagatgttac atgaatcact
481 gtaacacttc tattatccaa gagtcttgtg acaagcatta ttgggatact attagattta
541 ggtattgt
//
last modified: Tue May 31 10:56 2022