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LOCUS AM296485 394 bp RNA linear VRL 10-NOV-2006
DEFINITION Simian immunodeficiency virus partial env gene for envelope
glycoprotein, genomic RNA, isolate SIVgorCP684
ACCESSION AM296485
VERSION AM296485.1 GI:117910797
KEYWORDS env gene; envelope glycoprotein.
SOURCE Simian immunodeficiency virus
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Van Heuverswyn,F., Li,Y., Neel,C., Bailes,E., Keele,B.F., Liu,W.,
Loul,S., Butel,C., Liegeois,F., Bienvenue,Y., Ngolle,E.M.,
Sharp,P.M., Shaw,G.M., Delaporte,E., Hahn,B.H. and Peeters,M.
TITLE Human immunodeficiency viruses: SIV infection in wild gorillas
JOURNAL Nature 444 (7116), 164 (2006)
PUBMED 17093443
REFERENCE 2 (bases 1 to 394)
Show all sequences for reference 2
AUTHORS Van Heuverswyn,F.
TITLE Direct Submission
JOURNAL Submitted (08-AUG-2006) Van Heuverswyn F., UMR145, IRD, 911 Avenue
Agropolis, 34394 Montpellier Cedex 5, FRANCE
COMMENT All of the Gorilla SIV sequences from this publication were Gorilla
gorilla gorilla (Western lowlands gorilla) subspecies. SIV-positive
samples from two different wildlife areas labeled CP and BQ, over
400 kilometers apart, were the same areas where chimpanzees were
sampled without finding any SIV-CPZ seropositive chimpanzees.
FEATURES Location/Qualifiers
source 1..394
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/isolate="SIVgorCP684"
/isolation_source="fecal matter"
/host="Gorilla gorilla (wild)"
/db_xref="taxon:11723"
/country="Cameroon"
gene <1..>394
/gene="env"
CDS <1..>394
/gene="env"
/note="gp41 region of env"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="CAL30190.1"
/db_xref="GI:117910798"
/translation="NNMLRAIAAQQELLRLSVWGIRQLRARLLAIETYLRDQQLLGLW
GCTGKLICYTNVPWNTTWTGKSDSELDGIWGNLTWQQWDKLVDNYTDTIFLEIQKAQE
QQEANEKALLELDKWADLWSWLDITQWIW"
BASE COUNT 132 a 75 c 101 g 86 t
ORIGIN
1 aaacaacatg ctgagagcta tagcagctca gcaagaattg ctgagactct ctgtttgggg
61 cataagacag ctccgagctc gcctgctagc catagaaact tacctaagag accagcagct
121 cctaggactg tggggatgca cagggaaatt gatttgttac actaacgtgc catggaacac
181 tacctggacc gggaaaagtg atagtgaact agatggcatt tggggaaact tgacttggca
241 acaatgggac aaattggtag acaactacac tgacacaata tttttagaaa tacaaaaggc
301 acaagaacag caggaggcta atgaaaaggc cttactagag ttggataaat gggcagatct
361 ttggagttgg cttgacataa cacaatggat atgg
//
last modified: Tue May 31 10:56 2022