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LOCUS	    AM260272		    1777 bp    DNA     linear	VRL 02-FEB-2007
DEFINITION  Human immunodeficiency virus type 1 proviral partial gene for
	    gag-pol fusion polyprotein precursor, isolate 02BU.SF130
ACCESSION   AM260272
VERSION     AM260272.1 GI:124482991
KEYWORDS    gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
	    Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
  TITLE     HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
	    in Burundi
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
  PUBMED    17263648
REFERENCE   2 (bases 1 to 1777)
            Show all sequences for reference 2
  AUTHORS   Vidal,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
	    Agropolis, 34394 Montpellier, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1777
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="02BU.SF130"
		     /db_xref="taxon:11676"
		     /country="Burundi"
		     /note="subtype: C"
     CDS	     <1..>1777
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein precursor"
		     /protein_id="CAK18285.1"
		     /db_xref="GI:124482992"
		     /translation="FFRENLAFPQGEAREFPSEQTRANRPTSGEANSSTSRELQVRGD
		     NPLSEAGAERQGTLNCPQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEEIKLPGNW
		     KPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPINIIGRNMLTQLGCTLNFP
		     ISPIETVPVKLKPGMDGPKVKQWPLTDEKIKALTAICEEMEKEGKITKIGPENPYNTP
		     VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     VPLDEGFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKN
		     PGIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYE
		     LHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIRVKHLCKLLRGAKALTD
		     IVPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNL
		     KTGKYAKRRAAHTNDVKQLTEAVQKIALESIVIWGKTPKFRLPIQKETWEAWWIDYWQ
		     ATWIPEWEFVNTPPLVKLWYQWRKNP"
BASE COUNT	665 a	 325 c	  406 g    381 t
ORIGIN
       1 ttttttaggg agaatttggc cttcccacaa ggggaggcca gggaatttcc ttcagagcag 
      61 accagagcca accgccccac cagcggagag gccaacagct ccaccagcag agagcttcag 
     121 gttcgaggag acaaccccct ctccgaagca ggagctgaaa gacagggaac ccttaactgc 
     181 cctcaaatca ctctttggca gcgacccctt gtctcaataa aagtaggggg acaaataaaa 
     241 gaggctctct tagacacagg agcagatgat acagtattag aagaaataaa attgccagga 
     301 aattggaaac caaaaatgat aggaggaatt ggagggttta ttaaagtaag acagtatgat 
     361 caaatactta tagaaatttg tggaaaaaag gctataggta cagtactagt gggacctaca 
     421 cctatcaaca taatcggaag gaatatgttg actcagcttg gatgcacact aaattttcca 
     481 attagtccca ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtc 
     541 aaacaatggc cattgacaga cgagaaaata aaagcattaa cagcaatctg tgaagagatg 
     601 gagaaggagg gaaaaattac aaaaattggg cctgagaatc catataacac tccagtattt 
     661 gccataaaaa agaaggacag tactaagtgg agaaaattag tagattttag agaactcaat 
     721 aaaaggactc aggacttttg ggaagttcaa ttaggaatac cacacccagc agggttaaaa 
     781 aagaagaaat cagtaacagt actggatgtg ggggatgcat atttttcagt tcctttagat 
     841 gaaggtttca ggaaatatac tgcatttact atacctagta caaacaatga gacaccaggg 
     901 attagatatc agtataatgt gctaccacaa ggatggaaag gatcaccagc aatattccag 
     961 agtagcatga caaaaattct agagcccttt agagcaaaaa atccagggat agttatctat 
    1021 cagtacatgg atgacttgta tgtaggatct gacttagaaa tagggcaaca tagagcaaaa 
    1081 atagaggaat taagacaaca tcttttgaag tggggattta ccaccccaga taagaaacat 
    1141 cagaaagaac ctccatttct gtggatgggg tatgaacttc atcctgacaa atggacagta 
    1201 cagcctatac agctgccaga caaggatagc tggactgtca atgatataca gaagttagtg 
    1261 ggaaaattaa actgggcaag tcagatttac ccagggatta gagtaaagca cctgtgtaaa 
    1321 ctccttaggg gagccaaagc actaacagac atagtaccac tgactgaaga agcagaatta 
    1381 gaattggcag agaacaggga aattttaaaa gaaccagtac atggagtata ttatgaccca 
    1441 tcaaaagact taatagctga aatacagaaa caggggcatg accagtggac atatcaaatt 
    1501 taccaagagc cattcaaaaa cctgaaaaca gggaagtatg caaaaaggag agctgcccac 
    1561 actaatgatg taaaacagtt aacagaggca gtgcaaaaga tagccctgga aagcatagta 
    1621 atatggggaa agactcctaa atttagatta cccatccaga aagaaacatg ggaagcatgg 
    1681 tggatagact attggcaggc cacctggatt cctgaatggg agtttgttaa tacccctccc 
    1741 ctagtaaagt tatggtacca gtggagaaag aacccat
//
last modified: Tue May 31 10:56 2022


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