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LOCUS AM260272 1777 bp DNA linear VRL 02-FEB-2007
DEFINITION Human immunodeficiency virus type 1 proviral partial gene for
gag-pol fusion polyprotein precursor, isolate 02BU.SF130
ACCESSION AM260272
VERSION AM260272.1 GI:124482991
KEYWORDS gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
TITLE HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
in Burundi
JOURNAL AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
PUBMED 17263648
REFERENCE 2 (bases 1 to 1777)
Show all sequences for reference 2
AUTHORS Vidal,N.
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
Agropolis, 34394 Montpellier, FRANCE
FEATURES Location/Qualifiers
source 1..1777
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="02BU.SF130"
/db_xref="taxon:11676"
/country="Burundi"
/note="subtype: C"
CDS <1..>1777
/codon_start="1"
/transl_table="1"
/product="gag-pol fusion polyprotein precursor"
/protein_id="CAK18285.1"
/db_xref="GI:124482992"
/translation="FFRENLAFPQGEAREFPSEQTRANRPTSGEANSSTSRELQVRGD
NPLSEAGAERQGTLNCPQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEEIKLPGNW
KPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPINIIGRNMLTQLGCTLNFP
ISPIETVPVKLKPGMDGPKVKQWPLTDEKIKALTAICEEMEKEGKITKIGPENPYNTP
VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
VPLDEGFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKN
PGIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYE
LHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIRVKHLCKLLRGAKALTD
IVPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNL
KTGKYAKRRAAHTNDVKQLTEAVQKIALESIVIWGKTPKFRLPIQKETWEAWWIDYWQ
ATWIPEWEFVNTPPLVKLWYQWRKNP"
BASE COUNT 665 a 325 c 406 g 381 t
ORIGIN
1 ttttttaggg agaatttggc cttcccacaa ggggaggcca gggaatttcc ttcagagcag
61 accagagcca accgccccac cagcggagag gccaacagct ccaccagcag agagcttcag
121 gttcgaggag acaaccccct ctccgaagca ggagctgaaa gacagggaac ccttaactgc
181 cctcaaatca ctctttggca gcgacccctt gtctcaataa aagtaggggg acaaataaaa
241 gaggctctct tagacacagg agcagatgat acagtattag aagaaataaa attgccagga
301 aattggaaac caaaaatgat aggaggaatt ggagggttta ttaaagtaag acagtatgat
361 caaatactta tagaaatttg tggaaaaaag gctataggta cagtactagt gggacctaca
421 cctatcaaca taatcggaag gaatatgttg actcagcttg gatgcacact aaattttcca
481 attagtccca ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtc
541 aaacaatggc cattgacaga cgagaaaata aaagcattaa cagcaatctg tgaagagatg
601 gagaaggagg gaaaaattac aaaaattggg cctgagaatc catataacac tccagtattt
661 gccataaaaa agaaggacag tactaagtgg agaaaattag tagattttag agaactcaat
721 aaaaggactc aggacttttg ggaagttcaa ttaggaatac cacacccagc agggttaaaa
781 aagaagaaat cagtaacagt actggatgtg ggggatgcat atttttcagt tcctttagat
841 gaaggtttca ggaaatatac tgcatttact atacctagta caaacaatga gacaccaggg
901 attagatatc agtataatgt gctaccacaa ggatggaaag gatcaccagc aatattccag
961 agtagcatga caaaaattct agagcccttt agagcaaaaa atccagggat agttatctat
1021 cagtacatgg atgacttgta tgtaggatct gacttagaaa tagggcaaca tagagcaaaa
1081 atagaggaat taagacaaca tcttttgaag tggggattta ccaccccaga taagaaacat
1141 cagaaagaac ctccatttct gtggatgggg tatgaacttc atcctgacaa atggacagta
1201 cagcctatac agctgccaga caaggatagc tggactgtca atgatataca gaagttagtg
1261 ggaaaattaa actgggcaag tcagatttac ccagggatta gagtaaagca cctgtgtaaa
1321 ctccttaggg gagccaaagc actaacagac atagtaccac tgactgaaga agcagaatta
1381 gaattggcag agaacaggga aattttaaaa gaaccagtac atggagtata ttatgaccca
1441 tcaaaagact taatagctga aatacagaaa caggggcatg accagtggac atatcaaatt
1501 taccaagagc cattcaaaaa cctgaaaaca gggaagtatg caaaaaggag agctgcccac
1561 actaatgatg taaaacagtt aacagaggca gtgcaaaaga tagccctgga aagcatagta
1621 atatggggaa agactcctaa atttagatta cccatccaga aagaaacatg ggaagcatgg
1681 tggatagact attggcaggc cacctggatt cctgaatggg agtttgttaa tacccctccc
1741 ctagtaaagt tatggtacca gtggagaaag aacccat
//
last modified: Tue May 31 10:56 2022