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LOCUS	    AM260238		    1802 bp    DNA     linear	VRL 02-FEB-2007
DEFINITION  Human immunodeficiency virus type 1 proviral partial gene for
	    gag-pol fusion polyprotein precursor, isolate 02BU.U2202
ACCESSION   AM260238
VERSION     AM260238.1 GI:124482926
KEYWORDS    gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
	    Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
  TITLE     HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
	    in Burundi
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
  PUBMED    17263648
REFERENCE   2 (bases 1 to 1802)
            Show all sequences for reference 2
  AUTHORS   Vidal,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
	    Agropolis, 34394 Montpellier, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1802
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="02BU.U2202"
		     /db_xref="taxon:11676"
		     /country="Burundi"
		     /note="subtype: C"
     CDS	     <1..>1802
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein precursor"
		     /protein_id="CAK18251.1"
		     /db_xref="GI:124482927"
		     /translation="FFRENLAFPQGGEAREFPSEQXRANSPTTPSGQARANSPTSREL
		     QVRGTLSEAGAEGQGTLNFPQITLWQRPLVSIKVGGQVREALLDTGADDTVLEDINLP
		     GKWKPKMIGGIGGFIKVRQYDQIVIEICGKKAXGSVLVGPTPVNIIGRNMLTQLGCTL
		     NFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALIAICEEMEKEGKITKIGPENPY
		     NTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKXSVTVLDVGDA
		     YFSVPLDEDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPSIFQSSMTKILEPFR
		     TQNPXIVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWM
		     GYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKA
		     LTDIXPLTEEAELELAENREXLREPVHGXYYDPSKDLIAEIQKQGQDQWTYQIYQEPF
		     KNLKTGKYAKRRTAHTNDVKQLTEAVQKIALESIVIWGKTPKFRLPIQKETWEAWWTD
		     YWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGENS"
BASE COUNT	663 a	 327 c	  398 g    381 t     33 other
ORIGIN
       1 ttttttaggg aaaatytggc cttcccacaa gggggggagg ccagggaatt tccttcagaa 
      61 cagrccagag ccaacagccc caccactcct tcagggcagg ccagagccaa cagccccacc 
     121 agcagagagc ttcaggttcg aggaaccctc tccgaagcag gagccgaagg acarggaacc 
     181 cttaatttcc ctcaaatcac tctttggcag cgaccccttg tctcaataaa agtaggggga 
     241 caggtaaggg aggctctctt agacacagga gcagatgaya cagtattaga agayataaat 
     301 ttgcctggaa aatggaaacc aaaaatgata gggggaattg gaggttttat yaaagtaaga 
     361 cartatgatc aaatagttat agaaatttgt ggaaaaaagg ctatrggttc agtattagta 
     421 ggacctacrc ctgtcaayat aattggaaga aatatgttga ctcagcttgg atgtacacta 
     481 aattttccaa ttagtcccat tgaaacwgta ccagtaaaat taaagccagg watggatggc 
     541 ccaaaggtca aacaatggcc attgacagaa gaaaaaataa aagcattaat agcaatttgt 
     601 gaagagatgg araaggaagg aaaaattaca aaaattgggc ctgaaaatcc ctataacact 
     661 ccagtatttg ccataaaaaa gaaggacagt actaagtgga gaaagttagt agatttcagg 
     721 gagctcaata aaagaactca agacttctgg gaagttcaat tagggatacc acacccagca 
     781 gggttaaaaa agaaaaratc agtgacagta ctrgatgtgg gggatgcata tttctcagtt 
     841 cctttrgatg argacttcag gaaatatact gcattcacca taccwagtat aaacaatgaa 
     901 acaccaggag ttagatatca atataatgtr cttccacagg gatggaaagg atcaccatca 
     961 atattccaga gtagcatgac aaaaatctta gagcccttta ggacacaaaa cccagamata 
    1021 gtyatctatc aatatatgga tgacttgtat gtaggatctg acttagaaat agggcaacat 
    1081 agagcaaaaa tagaggaatt aagagaacat ctrttgaagt ggggatttac cactccagac 
    1141 aagaagcatc araaagaacc tccatttctt tggatggggt atgaacttca tcctgacaaa 
    1201 tggacagtac agcctataca gctgccagaa aargatagct ggactgtcaa tgatatacag 
    1261 aagttagtgg gaaaattaaa ctgggcaagt cagatttacc cagggattaa ggtraagcaa 
    1321 ytgtgtaaac tccttagggg agccaaagca ctaacagaca tartaccact gactgaagaa 
    1381 gcagaattag arttggcaga gaacagggaa aktctaagag aaccagtaca tggrgyatat 
    1441 tatgacccat caaaagactt aatagctgaa atacagaaac aggggcagga ccaatggacr 
    1501 tatcaaattt atcaagaacc attcaaaaat ctgaaaacag gaaagtatgc aaaaaggagg 
    1561 actgcccaca ctaatgatgt aaaacagtta acagaggcag tgcaaaaaat agccctggaa 
    1621 agcatagtaa tatggggaaa aactcctaaa tttagattac ccatccagaa agaaacatgg 
    1681 gargcatggt ggacagacta ttggcaagcc acctggattc ctgagtggga gtttgtcaat 
    1741 actcctcccc tagtaaagtt atggtaccag ctggagaaag aacccatagc aggagagaac 
    1801 tc
//
last modified: Tue May 31 10:56 2022


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