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LOCUS AM260225 1758 bp DNA linear VRL 02-FEB-2007
DEFINITION Human immunodeficiency virus type 1 proviral partial gene for
gag-pol fusion polyprotein precursor, isolate 02BU.U1811
ACCESSION AM260225
VERSION AM260225.1 GI:124482902
KEYWORDS gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
TITLE HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
in Burundi
JOURNAL AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
PUBMED 17263648
REFERENCE 2 (bases 1 to 1758)
Show all sequences for reference 2
AUTHORS Vidal,N.
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
Agropolis, 34394 Montpellier, FRANCE
FEATURES Location/Qualifiers
source 1..1758
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="02BU.U1811"
/db_xref="taxon:11676"
/country="Burundi"
/note="subtype: C"
CDS <1..>1758
/codon_start="1"
/transl_table="1"
/product="gag-pol fusion polyprotein precursor"
/protein_id="CAK18238.1"
/db_xref="GI:124482903"
/translation="FFRESLVFPQGEAREFPSEQARANSPTRANSSTSRELQVRGDPL
SEAGAESHGTLNFPQITLWQRPLVSIRIGGQTREALLDTGADDTVLEEIDLPGRWKPK
MIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISS
IKTVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKDGKITKIGPENPYNTPVFA
IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRTXNPEI
VIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHP
DKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTDVVP
LTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTG
KYARRRTAHTNDVKQLTEAVQKVAMESIVIWGKTPKFRLPIQKETWETWWTDYWQATW
IPEWEFVNTPPLVKLWYQLE"
BASE COUNT 660 a 318 c 396 g 380 t 4 other
ORIGIN
1 ttttttaggg aaagtctggt cttcccgcaa ggggaggcca gggaatttcc ttcagagcag
61 gccagagcca acagccccac cagagccaac agctccacca gcagagagct tcaggttcga
121 ggagaccccc tctctgaagc aggagccgaa agccacggaa cccttaattt ccctcaaatc
181 actctttggc agcgacccct tgtctcaata agaatagggg gacagacaag ggaggctctc
241 ttagacacag gagctgatga tacagtatta gaagaaatag atttgccagg aagatggaaa
301 ccaaaaatga taggaggaat tggaggtttt attaaagtaa gacagtatga tcaaatactt
361 atagaaattt gtggaaaaaa ggctataggt acagtattag taggacctac acctgtcaac
421 ataattggaa gaaacatgtt gactcagctt ggatgtacac taaattttcc aattagttct
481 atyaaaactg taccagtaaa attaaagcca gggatggatg gcccaaaagt taaacaatgg
541 ccactgacag aagagaaaat aaaagcatta acagcaattt gtgaagaaat ggagaaggac
601 ggaaaaatta caaaaattgg gcctgaaaat ccatataaya ctccagtgtt tgctataaaa
661 aagaaggaca gtactaagtg gagaaaatta gtagatttca gggaacttaa taaaagaact
721 caagactttt gggaagttca attagggata ccacacccag cagggttaaa aaagaaaaaa
781 tcagtaacag tactggatgt gggggatgca tacttctcag ttcctttaga tgaaagcttc
841 aggaagtata ctgcattcac catacctagt ataaacaatg aaacaccagg gattagatac
901 caatataatg tgcttccaca gggatggaaa ggatcaccag caatattcca gtgtagcatg
961 acaaaaatct tagagccctt taggacamaa aacccagaaa tagttatcta tcaatatatg
1021 gatgacttgt atgtaggatc tgacttagaa atagggcaac atagggcaaa aatagaggag
1081 ttaagagaac acctgttgaa gtgggggttt accacaccag acaagaaaca tcagaaagaa
1141 cctccatttc tttggatggg gtatgaacty catcctgaca aatggacagt acagcctata
1201 cagctgccag aaaaggatag ctggactgtc aatgatatac agaagttagt gggaaaatta
1261 aactgggcaa gtcagattta tccaggaatc aaagtaaagc agctgtgtaa actccttagg
1321 ggaaccaaag cactaacaga cgtagtacca ctgactgaag aagcagaatt agaattggca
1381 gagaacaggg agattctaaa agaaccagta catggagtat attatgaccc atcaaaagac
1441 ttaatagctg aaatacagaa acaggggcag gaccaatgga catatcaaat ttaccaagaa
1501 ccatttaaaa atctgaaaac agggaagtat gcaagaagga ggactgccca cactaatgat
1561 gtaaaacagt taacagaagc agtacaaaag gtagccatgg aaagcatagt aatatgggga
1621 aagactccta aatttagatt acccatccaa aaagaaacat gggagacatg gtggacagac
1681 tattggcaag ccacctggat tcctgagtgg gagtttgtta atacccctcc cctagtgaaa
1741 ctatggtacc aactggag
//
last modified: Tue May 31 10:56 2022