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LOCUS	    AM260225		    1758 bp    DNA     linear	VRL 02-FEB-2007
DEFINITION  Human immunodeficiency virus type 1 proviral partial gene for
	    gag-pol fusion polyprotein precursor, isolate 02BU.U1811
ACCESSION   AM260225
VERSION     AM260225.1 GI:124482902
KEYWORDS    gag polyprotein; gag-pol fusion; pol polyprotein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vidal,N., Niyongabo,T., Nduwimana,J., Butel,C., Ndayiragije,A.,
	    Wakana,J., Nduwimana,M., Delaporte,E. and Peeters,M.
  TITLE     HIV Type 1 Diversity and Antiretroviral Drug Resistance Mutations
	    in Burundi
  JOURNAL   AIDS Res. Hum. Retroviruses 23 (1), 175-180 (2007)
  PUBMED    17263648
REFERENCE   2 (bases 1 to 1758)
            Show all sequences for reference 2
  AUTHORS   Vidal,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2006) Vidal N., UMR145, I.R.D, 911 avenue
	    Agropolis, 34394 Montpellier, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1758
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="02BU.U1811"
		     /db_xref="taxon:11676"
		     /country="Burundi"
		     /note="subtype: C"
     CDS	     <1..>1758
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag-pol fusion polyprotein precursor"
		     /protein_id="CAK18238.1"
		     /db_xref="GI:124482903"
		     /translation="FFRESLVFPQGEAREFPSEQARANSPTRANSSTSRELQVRGDPL
		     SEAGAESHGTLNFPQITLWQRPLVSIRIGGQTREALLDTGADDTVLEEIDLPGRWKPK
		     MIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISS
		     IKTVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKDGKITKIGPENPYNTPVFA
		     IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
		     DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRTXNPEI
		     VIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHP
		     DKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTDVVP
		     LTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTG
		     KYARRRTAHTNDVKQLTEAVQKVAMESIVIWGKTPKFRLPIQKETWETWWTDYWQATW
		     IPEWEFVNTPPLVKLWYQLE"
BASE COUNT	660 a	 318 c	  396 g    380 t      4 other
ORIGIN
       1 ttttttaggg aaagtctggt cttcccgcaa ggggaggcca gggaatttcc ttcagagcag 
      61 gccagagcca acagccccac cagagccaac agctccacca gcagagagct tcaggttcga 
     121 ggagaccccc tctctgaagc aggagccgaa agccacggaa cccttaattt ccctcaaatc 
     181 actctttggc agcgacccct tgtctcaata agaatagggg gacagacaag ggaggctctc 
     241 ttagacacag gagctgatga tacagtatta gaagaaatag atttgccagg aagatggaaa 
     301 ccaaaaatga taggaggaat tggaggtttt attaaagtaa gacagtatga tcaaatactt 
     361 atagaaattt gtggaaaaaa ggctataggt acagtattag taggacctac acctgtcaac 
     421 ataattggaa gaaacatgtt gactcagctt ggatgtacac taaattttcc aattagttct 
     481 atyaaaactg taccagtaaa attaaagcca gggatggatg gcccaaaagt taaacaatgg 
     541 ccactgacag aagagaaaat aaaagcatta acagcaattt gtgaagaaat ggagaaggac 
     601 ggaaaaatta caaaaattgg gcctgaaaat ccatataaya ctccagtgtt tgctataaaa 
     661 aagaaggaca gtactaagtg gagaaaatta gtagatttca gggaacttaa taaaagaact 
     721 caagactttt gggaagttca attagggata ccacacccag cagggttaaa aaagaaaaaa 
     781 tcagtaacag tactggatgt gggggatgca tacttctcag ttcctttaga tgaaagcttc 
     841 aggaagtata ctgcattcac catacctagt ataaacaatg aaacaccagg gattagatac 
     901 caatataatg tgcttccaca gggatggaaa ggatcaccag caatattcca gtgtagcatg 
     961 acaaaaatct tagagccctt taggacamaa aacccagaaa tagttatcta tcaatatatg 
    1021 gatgacttgt atgtaggatc tgacttagaa atagggcaac atagggcaaa aatagaggag 
    1081 ttaagagaac acctgttgaa gtgggggttt accacaccag acaagaaaca tcagaaagaa 
    1141 cctccatttc tttggatggg gtatgaacty catcctgaca aatggacagt acagcctata 
    1201 cagctgccag aaaaggatag ctggactgtc aatgatatac agaagttagt gggaaaatta 
    1261 aactgggcaa gtcagattta tccaggaatc aaagtaaagc agctgtgtaa actccttagg 
    1321 ggaaccaaag cactaacaga cgtagtacca ctgactgaag aagcagaatt agaattggca 
    1381 gagaacaggg agattctaaa agaaccagta catggagtat attatgaccc atcaaaagac 
    1441 ttaatagctg aaatacagaa acaggggcag gaccaatgga catatcaaat ttaccaagaa 
    1501 ccatttaaaa atctgaaaac agggaagtat gcaagaagga ggactgccca cactaatgat 
    1561 gtaaaacagt taacagaagc agtacaaaag gtagccatgg aaagcatagt aatatgggga 
    1621 aagactccta aatttagatt acccatccaa aaagaaacat gggagacatg gtggacagac 
    1681 tattggcaag ccacctggat tcctgagtgg gagtttgtta atacccctcc cctagtgaaa 
    1741 ctatggtacc aactggag
//
last modified: Tue May 31 10:56 2022


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