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LOCUS	    AJ313404		    1802 bp    RNA     linear	VRL 15-APR-2005
DEFINITION  Human immunodeficiency virus type 1 partial pol gene, genomic RNA,
	    isolate 00GAB-02B
ACCESSION   AJ313404
VERSION     AJ313404.1 GI:19069768
KEYWORDS    pol gene; pol protein.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Vergne,L., Malonga-Mouellet,G., Mistoul,I., Mavoungou,R.,
	    Mansaray,H., Peeters,M. and Delaporte,E.
  TITLE     Resistance to antiretroviral treatment in Gabon: need for
	    implementation of guidelines on antiretroviral therapy use and
	    HIV-1 drug resistance monitoring in developing countries
  JOURNAL   J. Acquir. Immune Defic. Syndr. 29 (2), 165-168 (2002)
  PUBMED    11832686
REFERENCE   2 (bases 1 to 1802)
            Show all sequences for reference 2
  AUTHORS   Vergne,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2001) Vergne L., Retrovirus, Ird, 911, avenue
	    Agropolis, 34032 Montpellier Cedex 1, FRANCE
FEATURES             Location/Qualifiers
     source	     1..1802
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="00GAB-02B"
		     /db_xref="taxon:11676"
		     /country="Gabon"
     gene	     <50..>1802
		     /gene="pol"
     CDS	     <50..>1802
		     /gene="pol"
		     /function="protease and RT"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="CAC86180.1"
		     /db_xref="GI:19069769"
		     /db_xref="GOA:Q8Q888"
		     /db_xref="HSSP:P04585"
		     /db_xref="InterPro:IPR000477"
		     /db_xref="InterPro:IPR001969"
		     /db_xref="InterPro:IPR001995"
		     /db_xref="InterPro:IPR009007"
		     /db_xref="InterPro:IPR010659"
		     /db_xref="InterPro:IPR010661"
		     /db_xref="UniProtKB/TrEMBL:Q8Q888"
		     /translation="FRENLAFPQGKAGELSSEQTRANSPTSRELRVWGRDNPLSETGA
		     EGQRQGTVSCSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDINLPGKWKPKM
		     IGGIGGFIKVKQYDQILIEICGHRAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPI
		     ETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAI
		     KKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLD
		     EDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPELV
		     IYQYMDDLYVGSDLEIGQHRAKIEKLREHLLRWGLTTPDKKHQKEPPFLWMGYELHPD
		     KWTVQPIILPEKESWTVNDIQKLVGKLNWASQIYPGIRVKELCKLLRGAKALTEVIPL
		     TEEAELELAENREILKEPVHGVYYDPSKDLIADVQKQGQGQWTWQIYQEPFKNLKTGK
		     YARMRGTHTNDVKQLTEAVQKIATESIIIWGKTPKFRLPIQKETWDAWWTEYWQATWI
		     PEWEFVNTPPLVKLWYQL"
BASE COUNT	707 a	 307 c	  387 g    401 t
ORIGIN
       1 aaaaggaagg acaccaaatg aaagattgca ctgaaagaca ggcaaatttt ttagggaaaa 
      61 tttggccttc ccacaaggga aggccgggga actttcttca gagcagacca gagccaacag 
     121 ccccaccagc agagagcttc gggtttgggg aagagataac cccctctcag aaacaggagc 
     181 agaaggacaa agacaaggaa ctgtatcctg tagcttccct caaatcactc tttggcaacg 
     241 accccttgtt acaataaaag tagggggaca gctaaaagaa gctctattag atacaggagc 
     301 agatgataca gtattagaag acataaattt gccaggaaaa tggaaaccaa aaatgatagg 
     361 gggaattgga ggttttatca aagtaaaaca gtatgatcag atacttatag aaatctgtgg 
     421 acatagagct ataggtacag tattagtagg acctacacct gtcaacataa ttggaagaaa 
     481 tttgttgacc cagattggct gcactctaaa ttttccaatt agtcctattg aaactgtacc 
     541 agtaaaatta aagccaggaa tggatggccc aaaagttaaa caatggccat tgacagagga 
     601 aaaaataaaa gcattaacag aaatttgtac agaaatggaa aaggaaggaa aaatttccag 
     661 aattgggcct gaaaatccat acaatactcc aatatttgct ataaagaaga aagacagtac 
     721 taagtggaga aaattagtag atttcagaga actcaataaa agaactcaag acttctggga 
     781 agttcaacta ggaataccgc atcctgcagg gctaaaaaag aaaaaatcag taacagtact 
     841 agatgtgggt gatgcatatt tttcaatccc cttagatgaa gattttagga agtacactgc 
     901 attcaccata cccagtataa acaatgagac accagggatt agatatcagt acaatgtgct 
     961 tccacaagga tggaaaggat caccagcaat attccaaagt agtatgataa aaatcttaga 
    1021 gccttttagg aaacaaaatc cagaactagt tatctatcaa tacatggatg atttgtatgt 
    1081 aggatctgat ttagaaatag ggcagcatag agcaaaaata gagaaattaa gagagcatct 
    1141 attgaggtgg ggacttacca caccagacaa aaaacatcag aaagaacccc catttctttg 
    1201 gatgggttat gaactccatc ctgataaatg gacagttcag cctataattc tgccagaaaa 
    1261 agaaagctgg actgtcaatg atatacagaa gttagtagga aaattaaatt gggcaagcca 
    1321 gatttatcca ggaattagag taaaggaatt atgtaaactc cttaggggag ctaaagcatt 
    1381 aacagaggta ataccactaa cagaagaggc agaattagaa ctggcagaaa acagggagat 
    1441 tctcaaagaa ccagtacatg gagtatatta tgacccatca aaagacttaa tagcagacgt 
    1501 acagaaacaa gggcaaggcc aatggacttg gcaaatttat caagaaccat ttaaaaatct 
    1561 gaaaacagga aaatatgcaa gaatgagggg tacccacact aatgatgtaa aacaattaac 
    1621 agaggcagtg caaaaaatag ctacagaaag cataataata tggggaaaga ctcctaaatt 
    1681 tagactaccc atacaaaagg aaacatggga tgcatggtgg acggagtatt ggcaagccac 
    1741 ttggattcct gagtgggagt ttgtcaatac ccctccatta gtaaaactat ggtatcagtt 
    1801 ag
//
last modified: Tue May 31 10:56 2022


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