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LOCUS AJ313404 1802 bp RNA linear VRL 15-APR-2005
DEFINITION Human immunodeficiency virus type 1 partial pol gene, genomic RNA,
isolate 00GAB-02B
ACCESSION AJ313404
VERSION AJ313404.1 GI:19069768
KEYWORDS pol gene; pol protein.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Vergne,L., Malonga-Mouellet,G., Mistoul,I., Mavoungou,R.,
Mansaray,H., Peeters,M. and Delaporte,E.
TITLE Resistance to antiretroviral treatment in Gabon: need for
implementation of guidelines on antiretroviral therapy use and
HIV-1 drug resistance monitoring in developing countries
JOURNAL J. Acquir. Immune Defic. Syndr. 29 (2), 165-168 (2002)
PUBMED 11832686
REFERENCE 2 (bases 1 to 1802)
Show all sequences for reference 2
AUTHORS Vergne,L.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2001) Vergne L., Retrovirus, Ird, 911, avenue
Agropolis, 34032 Montpellier Cedex 1, FRANCE
FEATURES Location/Qualifiers
source 1..1802
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="00GAB-02B"
/db_xref="taxon:11676"
/country="Gabon"
gene <50..>1802
/gene="pol"
CDS <50..>1802
/gene="pol"
/function="protease and RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="CAC86180.1"
/db_xref="GI:19069769"
/db_xref="GOA:Q8Q888"
/db_xref="HSSP:P04585"
/db_xref="InterPro:IPR000477"
/db_xref="InterPro:IPR001969"
/db_xref="InterPro:IPR001995"
/db_xref="InterPro:IPR009007"
/db_xref="InterPro:IPR010659"
/db_xref="InterPro:IPR010661"
/db_xref="UniProtKB/TrEMBL:Q8Q888"
/translation="FRENLAFPQGKAGELSSEQTRANSPTSRELRVWGRDNPLSETGA
EGQRQGTVSCSFPQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDINLPGKWKPKM
IGGIGGFIKVKQYDQILIEICGHRAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPI
ETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAI
KKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPLD
EDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPELV
IYQYMDDLYVGSDLEIGQHRAKIEKLREHLLRWGLTTPDKKHQKEPPFLWMGYELHPD
KWTVQPIILPEKESWTVNDIQKLVGKLNWASQIYPGIRVKELCKLLRGAKALTEVIPL
TEEAELELAENREILKEPVHGVYYDPSKDLIADVQKQGQGQWTWQIYQEPFKNLKTGK
YARMRGTHTNDVKQLTEAVQKIATESIIIWGKTPKFRLPIQKETWDAWWTEYWQATWI
PEWEFVNTPPLVKLWYQL"
BASE COUNT 707 a 307 c 387 g 401 t
ORIGIN
1 aaaaggaagg acaccaaatg aaagattgca ctgaaagaca ggcaaatttt ttagggaaaa
61 tttggccttc ccacaaggga aggccgggga actttcttca gagcagacca gagccaacag
121 ccccaccagc agagagcttc gggtttgggg aagagataac cccctctcag aaacaggagc
181 agaaggacaa agacaaggaa ctgtatcctg tagcttccct caaatcactc tttggcaacg
241 accccttgtt acaataaaag tagggggaca gctaaaagaa gctctattag atacaggagc
301 agatgataca gtattagaag acataaattt gccaggaaaa tggaaaccaa aaatgatagg
361 gggaattgga ggttttatca aagtaaaaca gtatgatcag atacttatag aaatctgtgg
421 acatagagct ataggtacag tattagtagg acctacacct gtcaacataa ttggaagaaa
481 tttgttgacc cagattggct gcactctaaa ttttccaatt agtcctattg aaactgtacc
541 agtaaaatta aagccaggaa tggatggccc aaaagttaaa caatggccat tgacagagga
601 aaaaataaaa gcattaacag aaatttgtac agaaatggaa aaggaaggaa aaatttccag
661 aattgggcct gaaaatccat acaatactcc aatatttgct ataaagaaga aagacagtac
721 taagtggaga aaattagtag atttcagaga actcaataaa agaactcaag acttctggga
781 agttcaacta ggaataccgc atcctgcagg gctaaaaaag aaaaaatcag taacagtact
841 agatgtgggt gatgcatatt tttcaatccc cttagatgaa gattttagga agtacactgc
901 attcaccata cccagtataa acaatgagac accagggatt agatatcagt acaatgtgct
961 tccacaagga tggaaaggat caccagcaat attccaaagt agtatgataa aaatcttaga
1021 gccttttagg aaacaaaatc cagaactagt tatctatcaa tacatggatg atttgtatgt
1081 aggatctgat ttagaaatag ggcagcatag agcaaaaata gagaaattaa gagagcatct
1141 attgaggtgg ggacttacca caccagacaa aaaacatcag aaagaacccc catttctttg
1201 gatgggttat gaactccatc ctgataaatg gacagttcag cctataattc tgccagaaaa
1261 agaaagctgg actgtcaatg atatacagaa gttagtagga aaattaaatt gggcaagcca
1321 gatttatcca ggaattagag taaaggaatt atgtaaactc cttaggggag ctaaagcatt
1381 aacagaggta ataccactaa cagaagaggc agaattagaa ctggcagaaa acagggagat
1441 tctcaaagaa ccagtacatg gagtatatta tgacccatca aaagacttaa tagcagacgt
1501 acagaaacaa gggcaaggcc aatggacttg gcaaatttat caagaaccat ttaaaaatct
1561 gaaaacagga aaatatgcaa gaatgagggg tacccacact aatgatgtaa aacaattaac
1621 agaggcagtg caaaaaatag ctacagaaag cataataata tggggaaaga ctcctaaatt
1681 tagactaccc atacaaaagg aaacatggga tgcatggtgg acggagtatt ggcaagccac
1741 ttggattcct gagtgggagt ttgtcaatac ccctccatta gtaaaactat ggtatcagtt
1801 ag
//
last modified: Tue May 31 10:56 2022