HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AJ286447		     635 bp    DNA     linear	VRL 19-NOV-2000
DEFINITION  Human immunodeficiency virus type 1 proviral partial gag gene for
	    p24, subtype A, isolate 97GA.G31
ACCESSION   AJ286447
VERSION     AJ286447.1 GI:7532585
KEYWORDS    gag gene; p24.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 635)
            Show all sequences for reference 1
  AUTHORS   Montavon,C., Toure-Kane,C., Liegeois,F., Mpoudi,E., Bourgeois,A.,
	    Vergne,L., Perret,J.L., Boumah,A., Saman,E., Mboup,S., Delaporte,E.
	    and Peeters,M.
  TITLE     Most env and gag subtype A HIV-1 viruses circulating in West and
	    West Central Africa are similar to the prototype AG recombinant
	    virus IBNG
  JOURNAL   J. Acquir. Immune Defic. Syndr. 23 (5), 363-374 (2000)
  PUBMED    10866228
REFERENCE   2 (bases 1 to 635)
            Show all sequences for reference 2
  AUTHORS   Montavon,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2000) Montavon C., Laboratoire Retrovirus, Ird,
	    911, avenue Agropolis, 34032 Montpellier Cedex, FRANCE
FEATURES             Location/Qualifiers
     source	     1..635
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="97GA.G31"
		     /db_xref="taxon:11676"
		     /country="Gabon"
		     /note="subtype A"
     gene	     <1..>635
		     /gene="gag"
     CDS	     <1..>635
		     /gene="gag"
		     /codon_start="2"
		     /transl_table="1"
		     /product="p24"
		     /protein_id="CAB87067.1"
		     /db_xref="GI:7532586"
		     /db_xref="GOA:Q9IUQ7"
		     /db_xref="InterPro:IPR000721"
		     /db_xref="InterPro:IPR008916"
		     /db_xref="InterPro:IPR008919"
		     /db_xref="UniProtKB/TrEMBL:Q9IUQ7"
		     /translation="GQGQMVHQTLSPRTLNAWVKAVEEKGFQPRSYPMFSALSEGATP
		     QDLNMMLNIVGGHQAAMQMLKDPINEEAAEWDRVHPVQAGPIPPGQMRDPRGSDIAGT
		     TSTLQEQIGWMTSNPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYV
		     DRFFKCLRAEQATQAVKNWMTETLLVQNANPDCKTILRGLGTGATLEEMMT"
BASE COUNT	228 a	 122 c	  154 g    131 t
ORIGIN
       1 tgggcaaggg caaatggtac accagacctt gtcacctagg actttgaatg catgggtaaa 
      61 agcagtagaa gaaaaaggct ttcagcccag aagttatccc atgttctcag cattatcaga 
     121 gggagccacc ccacaagatt taaatatgat gctgaacata gtagggggac accaggcagc 
     181 tatgcaaatg ttaaaagatc ccatcaatga ggaagctgca gaatgggata gggtacatcc 
     241 agtacaggca ggccctattc ctccaggtca gatgagagac ccaaggggaa gtgacatagc 
     301 aggaactact agtacccttc aagaacaaat aggatggatg acaagcaatc cccctatccc 
     361 agtaggagaa atctataaaa gatggataat cctgggatta aataaaatag taagaatgta 
     421 tagccctgtt agcattctgg acataagaca agggccaaaa gagcctttca gagactatgt 
     481 agataggttc tttaaatgcc tcagagctga acaagctaca caggcggtaa aaaactggat 
     541 gacagaaaca ttgctggtcc aaaatgcgaa tccagattgt aagaccattt taagaggatt 
     601 aggaacaggg gctacattag aagaaatgat gacag
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health