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LOCUS	    AJ237791		     622 bp    DNA     linear	VRL 15-APR-2005
DEFINITION  Human immunodeficiency virus type 1 partial p24 gene, isolate EQS16
ACCESSION   AJ237791
VERSION     AJ237791.1 GI:4995216
KEYWORDS    p24 gene.
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1
            Show all sequences for reference 1
  AUTHORS   Triques,K., Bourgeois,A., Saragosti,S., Vidal,N., Mpoudi-Ngole,E.,
	    Nzilambi,N., Apetrei,C., Ekwalanga,M., Delaporte,E. and Peeters,M.
  TITLE     High diversity of HIV-1 subtype F strains in Central Africa
  JOURNAL   Virology 259 (1), 99-109 (1999)
  PUBMED    10364493
REFERENCE   2 (bases 1 to 622)
            Show all sequences for reference 2
  AUTHORS   Triques,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-1999) Triques K., Laboratoire Retrovirus, IRD,
	    34032, Montpellier, FRANCE
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Triques,K., Bourgeois,A., Vidal,N., Mpoudi-Ngole,E.,
	    Mulanga-Kabeya,C., Nzilambi,N., Torimiro,N., Saman,E., Delaporte,E.
	    and Peeters,M.
  TITLE     Near-full-length genome sequencing of divergent African HIV type 1
	    subtype F viruses leads to the identification of a new HIV type 1
	    subtype designated K
  JOURNAL   AIDS Res. Hum. Retroviruses 16 (2), 139-151 (2000)
  PUBMED    10659053
COMMENT     This sequence was shown by [1] to be a subtype F outlier, and
	    possibly a recombinant between the F1 and F2 groups discussed in
	    [1]. 
            Reference Triques et al., ARHR (1999) in press, supports this
	    finding.
FEATURES             Location/Qualifiers
     source	     1..622
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /strain="EQS16"
		     /isolate="EQS16"
		     /db_xref="taxon:11676"
		     /country="Democratic Republic of the Congo"
     gene	     <1..>622
		     /gene="p24"
     CDS	     <1..>622
		     /gene="p24"
		     /codon_start="1"
		     /transl_table="1"
		     /product="p24 protein"
		     /protein_id="CAB44300.1"
		     /db_xref="GI:4995217"
		     /db_xref="GOA:Q9WMW4"
		     /db_xref="InterPro:IPR000721"
		     /db_xref="InterPro:IPR008916"
		     /db_xref="InterPro:IPR008919"
		     /db_xref="UniProtKB/TrEMBL:Q9WMW4"
		     /translation="HQALSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTM
		     LNTVGGHQAAMQMLKDTINEEAAEWDRLHPVQAGPIPPGQLRDPRGSDIAGTTSTLQE
		     QIGWMTGNPPVPVGEIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFFKT
		     LRAEQATQEVKGWMTDTLLVQNANPDCKTILKALGPGATLEEMMTAC"
BASE COUNT	222 a	 127 c	  146 g    127 t
ORIGIN
       1 catcaggctc tatcacctag aactttaaat gcatgggtaa aagtgataga agaaaaggct 
      61 ttcagcccag aagtaatacc catgttttca gcattatcag aaggagccac tccacaagat 
     121 ttaaacacca tgctaaacac agtgggggga caccaagcag ctatgcaaat gttaaaagat 
     181 accatcaatg aggaagctgc agaatgggac aggttacacc cagtgcaggc aggacctatc 
     241 ccaccaggtc agctgagaga ccctagggga agtgatatag caggaactac tagtaccctt 
     301 caggaacaaa taggatggat gacaggcaac ccacctgtcc cagtgggaga aatctataaa 
     361 agatggataa tcctagggtt aaataagata gtcagaatgt atagccctgt cagcattttg 
     421 gacataaaac aagggccaaa agaacccttt agagactatg tagacaggtt ctttaaaact 
     481 ctaagagctg agcaagctac acaggaagta aagggttgga tgacagacac cttgttggtc 
     541 caaaatgcga atccagattg taagaccatt ttaaaagcac tgggaccagg ggctacacta 
     601 gaagaaatga tgacagcatg tc
//
last modified: Tue May 31 10:56 2022


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