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LOCUS AF544575 297 bp DNA linear VRL 27-MAR-2003
DEFINITION HIV-1 isolate 4858-112400 from USA protease (pol) gene, partial cds
ACCESSION AF544575
VERSION AF544575.1 GI:23507596
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Wu,T.D., Schiffer,C.A., Gonzales,M.J., Taylor,J., Kantor,R.,
Chou,S., Israelski,D., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
TITLE Mutation patterns and structural correlates in human
immunodeficiency virus type 1 protease following different protease
inhibitor treatments.
JOURNAL J. Virol. 77 (8), 4836-47 (2003)
PUBMED 12663790
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Wu,T.D., Schiffer,C.A., Taylor,J., Gonzales,M.J., Kantor,R.,
Chou,S., Israelski,D., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
TITLE Direct Submission
JOURNAL Submitted (09-SEP-2002) Medicine/Div of Infectious Diseases,
Stanford University, 300 Pasteur Drive, Grant Bldg, Room S-156,
Stanford, CA 94305, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Rhee,S.-Y., Fessel,W.J., Liu,T.F., Marlowe,N.M., Rowland,C.M.,
Rode,R.A., Vandamme,A.-M., Van Laethem,K., Brun-Vezinet,F.,
Calvez,V., Taylor,J., Hurley,L., Horberg,M. and Shafer,R.W.
TITLE Predictive value of HIV-1 genotypic resistance test interpretation
algorithms.
JOURNAL J. Infect. Dis.. 200(3); 453-63 (2009)
PUBMED 19552527
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="4858-112400"
/db_xref="taxon:11676"
/country="USA"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAN38239.1"
/db_xref="GI:23507597"
/translation="PQITLWQRPVVTIKIGGQLKEALLDTGADDTVLEEMSLPGKWKP
KMIGGVGGFIKVRQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNF"
BASE COUNT 106 a 47 c 69 g 75 t
ORIGIN
1 cctcaaatca ctctttggca acgacccgtt gtcacaataa aaataggggg gcaactgaag
61 gaagctctat tagatacagg agcagatgat acagtgttag aagaaatgag tttgccagga
121 aaatggaaac caaaaatgat agggggagtt ggaggtttta tcaaagtaag acagtatgat
181 cagataccca tagaaatctg tgggcataaa gctataggta cagtattaat aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagcttg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022