HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF544482		     297 bp    DNA     linear	VRL 27-MAR-2003
DEFINITION  HIV-1 isolate 1463-051898 from USA protease (pol) gene, partial cds
ACCESSION   AF544482
VERSION     AF544482.1 GI:23507410
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Wu,T.D., Schiffer,C.A., Gonzales,M.J., Taylor,J., Kantor,R.,
	    Chou,S., Israelski,D., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
  TITLE     Mutation patterns and structural correlates in human
	    immunodeficiency virus type 1 protease following different protease
	    inhibitor treatments.
  JOURNAL   J. Virol. 77 (8), 4836-47 (2003)
  PUBMED    12663790
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Wu,T.D., Schiffer,C.A., Taylor,J., Gonzales,M.J., Kantor,R.,
	    Chou,S., Israelski,D., Zolopa,A.R., Fessel,W.J. and Shafer,R.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2002) Medicine/Div of Infectious Diseases,
	    Stanford University, 300 Pasteur Drive, Grant Bldg, Room S-156,
	    Stanford, CA 94305, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="1463-051898"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAN38146.1"
		     /db_xref="GI:23507411"
		     /translation="PQITLWQRPIVTIKXGDQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVREYDQIPXEICGHKVIXTVLXGXTPVNVIGRNLMTQLGCTLNF"
BASE COUNT	110 a	  45 c	   63 g     72 t      7 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccatc gtcacaataa aartagggga tcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccaggg 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag agagtatgat 
     181 cagataccyr tagaaatctg tggacacaaa gttataasta cagtattaay aggasmtaca 
     241 cctgtcaacg taattggaag aaatctgatg actcagcttg gctgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health