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LOCUS	    AF536908		     431 bp    RNA     linear	VRL 18-NOV-2003
DEFINITION  HIV-1 clone PHI patient Z29 from USA isolation-source saliva
	    envelope glycoprotein (env) gene, partial cds
ACCESSION   AF536908
VERSION     AF536908.1 GI:24637913
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 431)
            Show all sequences for reference 1
  AUTHORS   Freel,S.A., Fiscus,S.A., Pilcher,C.D., Menezes,P., Giner,J.,
	    Patrick,E., Lennox,J.L., Hicks,C.B., Eron,J.J. Jr.. and
	    Shugars,D.C.
  TITLE     Envelope diversity, coreceptor usage and syncytium-inducing
	    phenotype of HIV-1 variants in saliva and blood during primary
	    infection
  JOURNAL   AIDS 17 (14), 2025-2033 (2003)
  PUBMED    14502005
REFERENCE   2 (bases 1 to 431)
            Show all sequences for reference 2
  AUTHORS   Shugars,D.C., Freel,S.A., Fiscus,S.A., Pilcher,C.D., Menezes,P.,
	    Giner,J., Patrick,E., Lennox,J.L., Hicks,C.B. and Eron,J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2002) Schools of Dentistry and Medicine,
	    University of North Carolina at Chapel Hill, University of North
	    Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
FEATURES             Location/Qualifiers
     source	     1..431
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolation_source="saliva"
		     /db_xref="taxon:11676"
		     /clone="PHI patient Z29"
		     /country="USA"
     gene	     <1..>431
		     /gene="env"
     CDS	     <1..>431
		     /gene="env"
		     /note="V1/V2 loop"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAN63923.1"
		     /db_xref="GI:24637914"
		     /translation="LWDQSLKPCVKLTPLCVTLNCTNATSINCTNVNSTDTANCTVNN
		     STDEMKNCSFDITTSVRDRTKKEYALFYSLDIVQIEDKSNKNKTDNYTSYRLIKCNTS
		     VITQACPKVSFEPIPIHYCTPAGFAILKCNDKKFNGTGPCK"
BASE COUNT	161 a	  77 c	   74 g    119 t
ORIGIN
       1 ttatgggatc aaagcctaaa gccatgtgta aaattaaccc cactctgcgt tactttaaat 
      61 tgcactaatg ccactagtat aaattgcact aatgtcaata gtactgatac agctaattgc 
     121 actgtgaata atagcacaga tgaaatgaaa aactgctctt tcgatatcac cacaagtgta 
     181 agagatagga caaagaaaga atatgctctc ttctatagcc ttgatatagt acaaatagag 
     241 gataagagta ataagaataa gactgataat tatactagct atagattaat aaagtgtaat 
     301 acctcagtca ttacacaagc ctgtccaaag gtatcctttg agccaattcc catacattac 
     361 tgtaccccgg ctggttttgc gattctaaag tgtaatgata agaagttcaa tggaacagga 
     421 ccatgtaaaa a
//
last modified: Tue May 31 10:56 2022


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