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LOCUS AF536899 396 bp RNA linear VRL 18-NOV-2003
DEFINITION HIV-1 clone PHI patient Z23 from USA isolation-source plasma
envelope glycoprotein (env) gene, partial cds
ACCESSION AF536899
VERSION AF536899.1 GI:24637895
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 396)
Show all sequences for reference 1
AUTHORS Freel,S.A., Fiscus,S.A., Pilcher,C.D., Menezes,P., Giner,J.,
Patrick,E., Lennox,J.L., Hicks,C.B., Eron,J.J. Jr.. and
Shugars,D.C.
TITLE Envelope diversity, coreceptor usage and syncytium-inducing
phenotype of HIV-1 variants in saliva and blood during primary
infection
JOURNAL AIDS 17 (14), 2025-2033 (2003)
PUBMED 14502005
REFERENCE 2 (bases 1 to 396)
Show all sequences for reference 2
AUTHORS Shugars,D.C., Freel,S.A., Fiscus,S.A., Pilcher,C.D., Menezes,P.,
Giner,J., Patrick,E., Lennox,J.L., Hicks,C.B. and Eron,J.J.
TITLE Direct Submission
JOURNAL Submitted (07-AUG-2002) Schools of Dentistry and Medicine,
University of North Carolina at Chapel Hill, University of North
Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
FEATURES Location/Qualifiers
source 1..396
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolation_source="plasma"
/db_xref="taxon:11676"
/clone="PHI patient Z23"
/country="USA"
gene <1..>396
/gene="env"
CDS <1..>396
/gene="env"
/note="V1/V2 loop"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAN63914.1"
/db_xref="GI:24637896"
/translation="LWDQSLKPCVKLTPLCVTLNCTNATSHHVNETACNGTKNNNVSM
KNCSFISEEMKNCSFNITSGIRDKVRKEYAVFYNLDIVQIDKNDTHSYRLVNCNTSVI
TQACPKVSFEPIPIHYCTPAGFALLKCNDK"
BASE COUNT 137 a 75 c 68 g 116 t
ORIGIN
1 ttatgggatc aaagcctaaa gccatgtgta aaactaaccc cactctgtgt tactttaaac
61 tgcactaacg ctacttcaca ccatgtgaat gagactgctt gtaatggtac taagaataat
121 aatgttagta tgaaaaactg ctctttcata agtgaagaaa tgaaaaactg ctctttcaat
181 atcacctcag gcataagaga taaggtgcgg aaagaatatg cagttttcta taaccttgat
241 atagtacaaa tagataaaaa tgatactcac agttataggt tggtaaattg taatacctca
301 gtcattacac aggcctgtcc aaaggtatcc tttgagccaa ttcccataca ttattgtacc
361 ccggctggtt ttgcactcct aaaatgtaat gataag
//
last modified: Tue May 31 10:56 2022