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LOCUS	    AF536878		     409 bp    RNA     linear	VRL 18-NOV-2003
DEFINITION  HIV-1 isolate 1 clone PHI patient Z11 from USA isolation-source
	    saliva nonfunctional envelope glycoprotein (env) gene, partial cds
ACCESSION   AF536878
VERSION     AF536878.1 GI:24637854
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 409)
            Show all sequences for reference 1
  AUTHORS   Freel,S.A., Fiscus,S.A., Pilcher,C.D., Menezes,P., Giner,J.,
	    Patrick,E., Lennox,J.L., Hicks,C.B., Eron,J.J. Jr.. and
	    Shugars,D.C.
  TITLE     Envelope diversity, coreceptor usage and syncytium-inducing
	    phenotype of HIV-1 variants in saliva and blood during primary
	    infection
  JOURNAL   AIDS 17 (14), 2025-2033 (2003)
  PUBMED    14502005
REFERENCE   2 (bases 1 to 409)
            Show all sequences for reference 2
  AUTHORS   Shugars,D.C., Freel,S.A., Fiscus,S.A., Pilcher,C.D., Menezes,P.,
	    Giner,J., Patrick,E., Lennox,J.L., Hicks,C.B. and Eron,J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2002) Schools of Dentistry and Medicine,
	    University of North Carolina at Chapel Hill, University of North
	    Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
FEATURES             Location/Qualifiers
     source	     1..409
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="1"
		     /isolation_source="saliva"
		     /db_xref="taxon:11676"
		     /clone="PHI patient Z11"
		     /country="USA"
     gene	     <1..>409
		     /gene="env"
     misc_feature    <1..>409
		     /gene="env"
		     /note="nonfunctional envelope glycoprotein; contains
		     premature stop codons; V1/V2 loop"
BASE COUNT	141 a	  76 c	   77 g    115 t
ORIGIN
       1 ttatgggatc aaagcctaaa gccatgtgta gaattaaccc cactctgtgt tactttagag 
      61 tgcactaatg ctaatgctac tgaaaccact aatagtagca ctattaatgc cactataagc 
     121 aagggaatgg acatgaaaaa ctgctctttc aatgtcacca cagacgtgag agataggatg 
     181 aagaaagaat ctgcactttt ttatagcctt gatttagtaa aaatgaatga taatgataat 
     241 gataatggta cctataggtt gataagttgc aatacctcag tcattacaca ggcctgtcca 
     301 aagataaact ttgagccaat tcccatacat tattgtgccc cagctggttt tgcgattcct 
     361 aaagtgtaat aataagacat tcaatggaag tggaccatgt acaaatgcc
//
last modified: Tue May 31 10:56 2022


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