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LOCUS AF527231 571 bp RNA linear VRL 09-JAN-2003
DEFINITION HIV-1 isolate BRP2039RT from Brazil reverse transcriptase (pol)
gene, partial cds
ACCESSION AF527231
VERSION AF527231.1 GI:27549674
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 571)
Show all sequences for reference 1
AUTHORS Soares,M.A., Oliveira,T., Brindeiro,R.M., Diaz,R.S., Sabino,E.C.,
Brigido, Ls.., Pires,I.L., Morgado,M.G., Candida,M.C., Barreira,D.,
Teixeira,P.R., Cassol,S. and Tanuri,A.
TITLE A specific subtype C of human immunodeficiency virus type 1
circulates in Brazil
JOURNAL AIDS 17 (1), 11-21 (2003)
PUBMED 12478065
REFERENCE 2 (bases 1 to 571)
Show all sequences for reference 2
AUTHORS Soares,M.A., Oliveira,T., Brindeiro,R.M., Diaz,R.S., Sabino,E.C.,
Brigido, Ls.., Pires,I.L., Morgado,M.G., Candida,M.C., Barreira,D.,
Teixeira,P.R., Cassol,S. and Tanuri,A.
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2002) Genetics, Universidade Federal do Rio de
Janeiro, CCS - Bloco A - sala A2-121 - Cidade Universitaria - Ilha
do Fundao, Rio de Janeiro, RJ 21944-970, Brazil
FEATURES Location/Qualifiers
source 1..571
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="BRP2039RT"
/db_xref="taxon:11676"
/country="Brazil"
gene <1..>571
/gene="pol"
CDS <1..>571
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAO19182.1"
/db_xref="GI:27549675"
/translation="AICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRE
LNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDENFRKYTAFTIPSMNN
ETPGIRYQYNVLPQGWKGSPSIFQSSMTRILEPFREQNPEIVIYQYMDDLYVGSDLEI
GKHRAKIEELREHLLKWGFTTPDKKHQKEP"
BASE COUNT 229 a 85 c 123 g 134 t
ORIGIN
1 gcaatttgtg aagaaatgga aaaggaagga aaaattacaa aaattgggcc tgaaaatcca
61 tataatactc cagtatttgc tataaaaaag aaggacagta ctaagtggag aaaattagta
121 gatttcaggg aactcaataa aagaactcaa gacttttggg aagttcaatt agggatacca
181 cacccagcag ggttaaaaaa gaaaaggtca gtgacagtac tggatgtggg ggatgcatat
241 ttttcagtac ctttagatga aaactttagg aaatatactg catttaccat acctagtatg
301 aacaatgaaa caccagggat tagatatcaa tataatgtgc ttccacaggg atggaaagga
361 tcaccatcga tattccagag tagtatgaca agaatcttag agccctttag ggaacaaaat
421 ccagaaatag ttatctatca atatatggat gacttgtatg tagggtctga cttagaaata
481 gggaaacata gagcaaaaat agaggagtta agagaacatc tattgaagtg gggattcacc
541 acaccagaca agaaacatca gaaagaaccc c
//
last modified: Tue May 31 10:56 2022