HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF509269		     612 bp    RNA     linear	VRL 10-JUL-2002
DEFINITION  HIV-1 isolate 017_10152 from France reverse transcriptase (pol)
	    gene, partial cds
ACCESSION   AF509269
VERSION     AF509269.1 GI:21218233
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 612)
            Show all sequences for reference 1
  AUTHORS   Cunningham,C.K., Chaix,M.-L., Rekacewicz,C., Britto,P.,
	    Rouzioux,C., Gelber,R.D., Dorenbaum,A., Delfraissy,J.F., Bazin,B.,
	    Mofenson,L. and Sullivan,J.L.
  TITLE     Development of resistance mutations in women receiving standard
	    antiretroviral therapy who received intrapartum nevirapine to
	    prevent perinatal human immunodeficiency virus type 1 transmission:
	    a substudy of pediatric AIDS clinical trials group protocol 316.
  JOURNAL   J. Infect. Dis.. 186(2); 181-8 (2002)
  PUBMED    12134253
REFERENCE   2 (bases 1 to 612)
            Show all sequences for reference 2
  AUTHORS   Chaix,M.-L. and Rouzioux,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAY-2002) Virology, Hospital Necker-Enfants Malades,
	    149 rue de Sevres, Paris 75015, France
FEATURES             Location/Qualifiers
     source	     1..612
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="017_10152"
		     /db_xref="taxon:11676"
		     /country="France"
     gene	     <1..>612
		     /gene="pol"
     CDS	     <1..>612
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="AAM43987.1"
		     /db_xref="GI:21218234"
		     /translation="MEKEGKITRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRT
		     QDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGI
		     RYQYNVLPQGWKGSPSIFQSSMTKILEPFRKRNPEIVIYQYMDDLYVGSDLEIGQHRT
		     KIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPI"
BASE COUNT	241 a	 101 c	  123 g    147 t
ORIGIN
       1 atggaaaaag aaggaaaaat tacaagaatt gggcctgaaa atccatacaa tactccaata 
      61 tttgccataa agaaaaagga cagtactaag tggagaaaat tggtagattt cagagaactt 
     121 aataagagaa ctcaagactt ctgggaagtc caattaggaa taccgcatcc ttcagggcta 
     181 aaaaagaaaa aatcagtaac agtactggat gtaggtgatg catatttttc agttccctta 
     241 gatgaagact ttaggaagta tactgcattt accataccta gtataaacaa tgagacacca 
     301 gggattagat atcagtacaa tgtgcttccg caaggatgga aaggatcacc atcaatcttc 
     361 caaagtagca tgacaaaaat cttagagcct tttagaaaac gaaatccaga aatagtgatc 
     421 tatcaataca tggatgatct gtatgtagga tctgatttag aaatagggca gcatagaaca 
     481 aaaatagagg aattaagaga acacctgttg aggtggggat ttactacacc agacaaaaaa 
     541 catcagaaag aacctccatt tctttggatg ggttatgaac tccatcctga taaatggaca 
     601 gtacagccca ta
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health