View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AF405824 630 bp DNA linear VRL 07-SEP-2006
DEFINITION HIV-1 clone 1P2-11 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION AF405824
VERSION AF405824.1 GI:18650987
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 630)
Show all sequences for reference 1
AUTHORS Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
Hwangbo,Y., Mullins,J.I. and Corey,L.
TITLE Evidence for human immunodeficiency virus type 1 replication in
vivo in CD14(+) monocytes and its potential role as a source of
virus in patients on highly active antiretroviral therapy
JOURNAL J. Virol. 76 (2), 707-716 (2002)
PUBMED 11752161
REFERENCE 2 (bases 1 to 630)
Show all sequences for reference 2
AUTHORS Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
Hwangbo,Y., Mullins,J.I. and Corey,L.
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) Laboratory Medicine, University of
Washington, 960 Republican St. Room 362, Seattle, WA 98195-8070,
USA
COMMENT Days since seroconversion calculated as (days since onset of
symptoms) - (days between symptom onset and seroconversion).
FEATURES Location/Qualifiers
source 1..630
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/db_xref="taxon:11676"
/clone="1P2-11"
/country="USA: Seattle"
gene <1..>630
/gene="env"
CDS <1..>630
/gene="env"
/note="gp120"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAL76512.1"
/db_xref="GI:18650988"
/translation="EEEVVIRSENLTDNTKIIMVQLNKSVVINCTRPNNNTRKSIHIG
PGRAFYATGGVIGDIRQAHCNISRKDWYEALQQIAIKLREQFENRTIAFNRSSGGDPE
SVTHSFNCAGEFFYCNTTQLFNNTWNGTGWSDNSENTTGNGTITLPCRMRQIVNMWQE
VGKAMYAPPIRGLIRCSSNITGLLLTRDGGNNTTTNGTQTEIFRPGGGD"
BASE COUNT 250 a 103 c 134 g 143 t
ORIGIN
1 cagaagaaga ggtagtaatt agatctgaaa atctcacaga caatactaaa atcataatgg
61 tacagctgaa caaatctgta gtaattaatt gtacaagacc caacaacaat acaagaaaaa
121 gtatacatat aggaccaggg agagcatttt atgcaacagg aggagtaata ggagatataa
181 gacaagcaca ttgtaacatt agtagaaaag actggtatga agctttacaa cagatagcta
241 tcaaattaag agagcaattt gagaatagaa caatagcctt taatcgatcc tcgggaggag
301 atccagaaag tgtaacacac agttttaatt gtgcagggga atttttctac tgtaatacaa
361 cacaactgtt taataatact tggaatggta ctggatggtc agataactca gagaacacta
421 caggaaacgg aactatcaca ctcccatgca gaatgagaca aattgttaac atgtggcagg
481 aagtaggaaa agcaatgtat gcccctccca tcagaggact aattagatgt tcatcaaata
541 ttacagggct gctattaaca agagatggag gtaataatac caccacgaac gggactcaga
601 ctgagatatt cagacctgga ggaggagata
//
last modified: Tue May 31 10:56 2022