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LOCUS AF405811 1059 bp DNA linear VRL 07-SEP-2006
DEFINITION HIV-1 clone 1M2-33 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION AF405811
VERSION AF405811.1 GI:18650961
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1059)
Show all sequences for reference 1
AUTHORS Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
Hwangbo,Y., Mullins,J.I. and Corey,L.
TITLE Evidence for human immunodeficiency virus type 1 replication in
vivo in CD14(+) monocytes and its potential role as a source of
virus in patients on highly active antiretroviral therapy
JOURNAL J. Virol. 76 (2), 707-716 (2002)
PUBMED 11752161
REFERENCE 2 (bases 1 to 1059)
Show all sequences for reference 2
AUTHORS Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
Hwangbo,Y., Mullins,J.I. and Corey,L.
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) Laboratory Medicine, University of
Washington, 960 Republican St. Room 362, Seattle, WA 98195-8070,
USA
COMMENT Days since seroconversion calculated as (days since onset of
symptoms) - (days between symptom onset and seroconversion).
FEATURES Location/Qualifiers
source 1..1059
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/db_xref="taxon:11676"
/clone="1M2-33"
/country="USA: Seattle"
gene <1..>1059
/gene="env"
CDS <1..>1059
/gene="env"
/note="gp120"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAL76499.1"
/db_xref="GI:18650962"
/translation="APAGFAILKCFNKTFNGTGPCINVSTVQCTHGIRPVVSTQLLLN
GSLAEEEVVIRSENLTDNTKIIIVQLNKSVVINCTRPNNNTRKSIHIGPGSAFYATGE
VIGDIRQAHCNISREDWYEALQQVAIKLRNKFENKTIAFNRSSGGDPEIVTHTFNCGG
EFFYCNTSQLFNNTWNGTGWSDNSENTTGKGTITLPCRIKQIVNLWQEVGKAMYAPPI
RGLIRCSSNITGLLLTRDGGNGVNITNTTMNGTEIFRPGGGDMRDNWRSELYKYKVVK
IEPLGVAPTRAKRRVVQRERRAALGALFLGFLGAAGSTMGAASMTLTVQARLLLSGIV
QQQNNLLRAIEAQQHLLQL"
BASE COUNT 391 a 174 c 242 g 252 t
ORIGIN
1 gccccggctg gttttgcgat tctaaaatgt tttaataaga cattcaatgg aacaggacca
61 tgtataaatg tcagcacagt acaatgtaca catggaatta gaccagtagt atcaactcaa
121 ctgctgttaa atggcagttt ggcagaagaa gaggtagtaa ttagatctga aaatctcaca
181 gacaatacta aaatcataat agtacagctg aacaaatccg tagtaattaa ttgtacaaga
241 cccaacaaca atacaagaaa aagtatacat ataggaccag ggagcgcatt ttatgcaaca
301 ggagaagtaa taggagatat aagacaagca cattgtaaca ttagtagaga agactggtat
361 gaagctttac aacaggtagc tatcaaatta agaaataaat ttgagaataa aacaatagcc
421 tttaatcgat cctcgggagg agatccagaa attgtaacac acacttttaa ttgtggaggg
481 gaattcttct attgtaatac atcacaactg tttaataata cttggaatgg tactggatgg
541 tcagataact cagagaacac tacaggaaaa ggaactatca cactcccatg cagaataaaa
601 caaattgtta acttgtggca ggaagtagga aaagcaatgt atgcccctcc catcagagga
661 ctaattagat gttcatcaaa tattacaggg ctgctattaa caagagatgg aggtaatgga
721 gttaatatca ctaataccac catgaacggg actgagatat tcagacctgg aggaggagat
781 atgagggaca attggagaag tgaattatat aaatataaag tagtaaaaat tgaaccatta
841 ggggtagcac ccactagggc aaagagaaga gtggtgcaga gagaaagaag agcagcacta
901 ggagctttgt tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaatg
961 acgctgacgg tacaggccag actattattg tctggtatag tgcaacagca gaataatttg
1021 ctgagggcta ttgaggcgca acagcatctg ttgcaactc
//
last modified: Tue May 31 10:56 2022