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LOCUS	    AF405810		    1059 bp    DNA     linear	VRL 07-SEP-2006
DEFINITION  HIV-1 clone 1M2-31 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   AF405810
VERSION     AF405810.1 GI:18650959
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1059)
            Show all sequences for reference 1
  AUTHORS   Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
	    Hwangbo,Y., Mullins,J.I. and Corey,L.
  TITLE     Evidence for human immunodeficiency virus type 1 replication in
	    vivo in CD14(+) monocytes and its potential role as a source of
	    virus in patients on highly active antiretroviral therapy
  JOURNAL   J. Virol. 76 (2), 707-716 (2002)
  PUBMED    11752161
REFERENCE   2 (bases 1 to 1059)
            Show all sequences for reference 2
  AUTHORS   Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
	    Hwangbo,Y., Mullins,J.I. and Corey,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2001) Laboratory Medicine, University of
	    Washington, 960 Republican St. Room 362, Seattle, WA 98195-8070,
	    USA
COMMENT     Days since seroconversion calculated as (days since onset of
	    symptoms) - (days between symptom onset and seroconversion).
FEATURES             Location/Qualifiers
     source	     1..1059
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /db_xref="taxon:11676"
		     /clone="1M2-31"
		     /country="USA: Seattle"
     gene	     <1..>1059
		     /gene="env"
     CDS	     <1..>1059
		     /gene="env"
		     /note="gp120"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAL76498.1"
		     /db_xref="GI:18650960"
		     /translation="APAGFAILKCFNKTFNGTGPCINVSTVQCTHGIRPVVSTQLLLN
		     GSLAEEEVVIRSENLTDNTKIIIVQLNKSVVINCTRPNNNTRKSIHIGPGSAFYATGE
		     VIGDIRQAHCNISREDWYEALQQVAIKLRNKFENKTIAFNRSSGGDPEIVTHTFNCGG
		     EFFYCNTSQLFNNTWNGTGWSDNSENTTGKGTITLPCRIKQIVNLWQEVGKAMYAPPI
		     RGLIRCSSNITGLLLTRDGGNGVNITNTTMNGTEIFRPGGGDMRDNWRSELYKYKVVK
		     IEPLGVAPTRAKRRVVQRERRAALGALFLGFLGAAGSTMGAASMTLTVQARLLLSGIV
		     QQQNNLLRAIGAQQHLLQL"
BASE COUNT	390 a	 173 c	  243 g    253 t
ORIGIN
       1 gccccggctg gttttgcgat tctaaaatgt tttaataaga cattcaatgg aacaggacca 
      61 tgtataaatg tcagcacagt acaatgtaca catggaatta gaccagtagt atcaactcaa 
     121 ctgctgttaa atggcagttt ggcagaagaa gaggtagtaa ttagatctga aaatctcaca 
     181 gacaatacta aaatcataat agtacagctg aacaaatctg tagtaattaa ttgtacaaga 
     241 cccaacaaca atacaagaaa aagtatacat ataggaccag ggagcgcatt ttatgcaaca 
     301 ggagaagtaa taggggatat aagacaagca cattgtaaca ttagtagaga agactggtat 
     361 gaagctttac aacaggtagc tatcaaatta agaaataaat ttgagaataa aacaatagcc 
     421 tttaatcgat cctcgggagg agatccagaa attgtaacac acacttttaa ttgtggaggg 
     481 gaattcttct attgtaatac atcacaactg tttaataata cttggaatgg tactggatgg 
     541 tcagataact cagagaacac tacaggaaaa ggaactatca cactcccatg cagaataaaa 
     601 caaattgtta acttgtggca ggaagtagga aaagcaatgt atgcccctcc catcagagga 
     661 ctaattagat gttcatcaaa tattacaggg ctgctattaa caagagatgg aggtaatgga 
     721 gttaatatca ctaataccac catgaacggg actgagatat tcagacctgg aggaggagat 
     781 atgagggaca attggagaag tgaattatat aaatataaag tagtaaaaat tgaaccatta 
     841 ggagtagcac ccactagggc aaagagaaga gtggtgcaga gagaaagaag agcagcacta 
     901 ggagctttgt tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaatg 
     961 acgctgacgg tacaggccag actattattg tctggtatag tgcaacagca gaataatttg 
    1021 ctgagggcta ttggggcgca acagcatctg ttgcaactc
//
last modified: Tue May 31 10:56 2022


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