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LOCUS AF405774 1050 bp DNA linear VRL 07-SEP-2006
DEFINITION HIV-1 clone 1R2-25 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION AF405774
VERSION AF405774.1 GI:18650887
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1050)
Show all sequences for reference 1
AUTHORS Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
Hwangbo,Y., Mullins,J.I. and Corey,L.
TITLE Evidence for human immunodeficiency virus type 1 replication in
vivo in CD14(+) monocytes and its potential role as a source of
virus in patients on highly active antiretroviral therapy
JOURNAL J. Virol. 76 (2), 707-716 (2002)
PUBMED 11752161
REFERENCE 2 (bases 1 to 1050)
Show all sequences for reference 2
AUTHORS Zhu,T., Muthui,D., Holte,S., Nickle,D., Feng,F., Brodie,S.,
Hwangbo,Y., Mullins,J.I. and Corey,L.
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) Laboratory Medicine, University of
Washington, 960 Republican St. Room 362, Seattle, WA 98195-8070,
USA
COMMENT Days since seroconversion calculated as (days since onset of
symptoms) - (days between symptom onset and seroconversion).
FEATURES Location/Qualifiers
source 1..1050
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/db_xref="taxon:11676"
/clone="1R2-25"
/country="USA: Seattle"
gene <1..>1050
/gene="env"
CDS <1..>1050
/gene="env"
/note="gp120"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAL76462.1"
/db_xref="GI:18650888"
/translation="APAGFAILKCFNKTFNGTGPCINVSTVQCTHGIRPVVSTQLLLN
GSLAEEEVVIRSENLTDNTKIIIVQLNKSVVINCTRPNNNTRKSIHIGPGRAFYATGE
VIGDMRQAHCNISRKDWYEALQQIAIKLREQFENRTIAFNRSSGGDPEIVTHSFNCAG
EFFYCNTTQLFNNTWNGTGRSDNSENTTGNGTITLPCRMRQIVNMWQEVGKAMYAPPI
RGLIRCSSNITGLLLTRDGGNNTTTNGTQTEIFRPGGGDMRDNWRSELYKYKVVKIEP
LGVAPTRAKRRVVQREKRAALGALFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQ
NNLLRAIEAQQHLLQL"
BASE COUNT 387 a 178 c 243 g 242 t
ORIGIN
1 gccccggctg gttttgcgat tctaaaatgt tttaataaga cattcaatgg aacaggacca
61 tgtataaatg tcagcacagt acaatgtaca catggaatta gaccagtagt atcaactcaa
121 ctgctgttaa atggcagtct ggcagaagaa gaggtagtaa ttagatctga aaatctcaca
181 gacaatacta aaatcataat agtacagctg aacaaatctg tagtaattaa ttgtacaaga
241 cccaacaaca atacaagaaa aagtatacat ataggaccag ggagagcatt ttatgcaaca
301 ggagaagtaa taggagatat gagacaagca cattgtaaca ttagtagaaa agactggtat
361 gaagctttac aacagatagc tatcaaatta agagagcaat ttgagaatag aacaatagcc
421 tttaatcgat cctcgggagg agatcccgaa attgtaacac acagttttaa ttgtgcaggg
481 gaatttttct actgtaatac aacacaactg tttaataata cttggaatgg tactggacgg
541 tcagataact cagagaacac tacaggaaac ggaactatca cactcccatg cagaatgaga
601 caaattgtta acatgtggca ggaagtagga aaagcaatgt atgcccctcc catcagagga
661 ctaattagat gttcatcaaa tattacaggg ctgctattaa caagagatgg aggtaataat
721 accaccacga acgggactca gactgagata ttcagacctg gaggaggaga tatgagggac
781 aattggagaa gtgaattata taaatataaa gtagtaaaaa ttgaaccatt aggagtagca
841 cccactaggg caaagagaag agtggtgcag agagaaaaaa gagcagcact aggagcgttg
901 ttccttgggt tcttgggagc agcaggaagc actatgggcg cagcgtcaat gacgctgacg
961 gtacaggcca gactattatt gtctggtata gtgcaacagc agaataattt gctgagggct
1021 attgaggcgc aacagcatct gttgcaactc
//
last modified: Tue May 31 10:56 2022