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LOCUS	    AF383892		     985 bp    RNA     linear	VRL 14-AUG-2001
DEFINITION  HIV-1 isolate C12 clone 8.3 from USA pol protein (pol) gene,
	    partial cds
ACCESSION   AF383892
VERSION     AF383892.1 GI:15150171
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 985)
            Show all sequences for reference 1
  AUTHORS   Hermankova,M., Ray,S.C., Ruff,C., Powell-Davis,M., Ingersoll,R.,
	    D'Aquila,R.T., Quinn,T.C., Siliciano,J.D., Siliciano,R.F. and
	    Persaud,D.
  TITLE     HIV-1 drug resistance profiles in children and adults with viral
	    load of <50 copies/ml receiving combination therapy
  JOURNAL   JAMA 286 (2), 196-207 (2001)
  PUBMED    11448283
REFERENCE   2 (bases 1 to 985)
            Show all sequences for reference 2
  AUTHORS   Hermankova,M., Ray,S.C., Ruff,C., Powell-Davis,M., Ingersoll,R.,
	    D'Aquila,R.T., Quinn,T.C., Siliciano,J.D., Siliciano,R.F. and
	    Persaud,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2001) Department of Medicine, Division of
	    Infectious Diseases, Johns Hopkins University School of Medicine,
	    720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES             Location/Qualifiers
     source	     1..985
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="C12"
		     /db_xref="taxon:11676"
		     /clone="8.3"
		     /country="USA"
		     /note="from plasma of pediatric patient C12; 33.7 months
		     of HAART"
     gene	     <1..>985
		     /gene="pol"
     CDS	     <1..>985
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAK85333.1"
		     /db_xref="GI:15150172"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKEGTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     IVIYQYMDDLYVGSDLEIEQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLW"
BASE COUNT	387 a	 166 c	  203 g    229 t
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccca tagaaatctg tggacacaaa gctataggta cagtcttagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gatgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatctg tacagaaatg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt 
     481 gctataaaga aaaaagaagg tactagatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcctgc agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcatttacc atacctagta taaacaatga gacacccggg 
     721 attaggtatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaga tagagcagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctattgcgg tggggattta ccacaccaga caaaaaacac 
     961 cagaaagaac ccccattcct ctgga
//
last modified: Tue May 31 10:56 2022


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