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LOCUS AF375238 1020 bp RNA linear VRL 02-OCT-2001
DEFINITION HIV-1 isolate F from USA reverse transcriptase (pol) gene, partial
cds
ACCESSION AF375238
VERSION AF375238.1 GI:14210245
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1020)
Show all sequences for reference 1
AUTHORS Barditch-Crovo,P., Deeks,S.G., Collier,A., Safrin,S., Coakley,D.F.,
Miller,M., Kearney,B.P., Coleman,R.L., Lamy,P.D., Kahn,J.O.,
McGowan,I. and Lietman,P.S.
TITLE Phase i/ii trial of the pharmacokinetics, safety, and
antiretroviral activity of tenofovir disoproxil fumarate in human
immunodeficiency virus-infected adults
JOURNAL Antimicrob. Agents Chemother. 45 (10), 2733-2739 (2001)
PUBMED 11557462
REFERENCE 2 (bases 1 to 1020)
Show all sequences for reference 2
AUTHORS Miller,M.D. and Lamy,P.D.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) Clinical Virology, Gilead Sciences, 333
Lakeside Dr., Foster City, CA 94404, USA
FEATURES Location/Qualifiers
source 1..1020
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="F"
/db_xref="taxon:11676"
/country="USA"
/note="pretherapy isolate"
gene <1..>1020
/gene="pol"
CDS <1..>1020
/gene="pol"
/note="polymerase"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAK56952.1"
/db_xref="GI:14210246"
/translation="PYXPIDTVPVKLKPGMDGPKVKQWPXTEEKIKALVEICTEMEKE
GKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
KKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILEPFRKQNPDIVIYQYXDDLYVGSDLEIEQHRTKIEELREHLXKWGXTTPD
KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKESWTVNDIQKLVGKLNWASQXYPGIKV
KQLCXLLRGTKALTEVVTLTEEAELELEXXFXILREPVHGVYYEPSKXXIADIXXXXK
THRXXW"
BASE COUNT 400 a 160 c 205 g 227 t 28 other
ORIGIN
1 ccctatnagc ctattgacac tgtaccagta aaattaaagc caggaatgga tggcccaaaa
61 gttaaacaat ggccattvac agaagaaaaa ataaaagcat tagtagaaat ttgtacagaa
121 atggaaaagg aaggaaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta
181 tttgccataa agaaaaaaga cagtactaaa tggagaaaat tagtagattt cagagaactt
241 aataagagaa ctcaagactt ctgggaagtt caattaggga taccacatcc ggcagggttg
301 aaaaagaaaa aatcagtaac agtactggat gtgggtgatg catacttttc agttccctta
361 gataaagact tcaggaagta tactgcattt accataccta gtataaacaa tgagacacca
421 ggaattagat atcagtayaa tgtgcttcca cagggatgga aaggatcncc agcaatattc
481 caaagtagca tgacaaaaat cttagagcct tttagaaaac aaaatccaga catagttatc
541 tatcaatacr tggatgattt gtatgtagga tctgacttag aaatagagca gcatagaaca
601 aaaatagagg agctvagaga acatctgtda aagtgggggk tgaccacacc agacaaaaaa
661 catcagaaag aacctccatt tctttggatg ggttatgaac tccatcctga taaatggaca
721 gtacagccta tagtactgcc agaaaaagaa agctggactg tcaatgacat acaaaagtta
781 gtgggaaaat taaattgggc aagtcagawt tatccaggga tcaaagtaaa gcaattatgt
841 waactcctta ggggaactaa agcactaaca gaagtwgtta cactaacaga agaagcagag
901 ctagaactgg aacwhamttt ttwgatactm agagaaccag tacatggagt gtattatgag
961 ccatcaaaag abttwatagc agatatayag wnhgwtcbba aractcatag gasgckgtgg
//
last modified: Tue May 31 10:56 2022