View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AF375235 840 bp RNA linear VRL 02-OCT-2001
DEFINITION HIV-1 isolate D from USA reverse transcriptase (pol) gene, partial
cds
ACCESSION AF375235
VERSION AF375235.1 GI:14210239
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 840)
Show all sequences for reference 1
AUTHORS Barditch-Crovo,P., Deeks,S.G., Collier,A., Safrin,S., Coakley,D.F.,
Miller,M., Kearney,B.P., Coleman,R.L., Lamy,P.D., Kahn,J.O.,
McGowan,I. and Lietman,P.S.
TITLE Phase i/ii trial of the pharmacokinetics, safety, and
antiretroviral activity of tenofovir disoproxil fumarate in human
immunodeficiency virus-infected adults
JOURNAL Antimicrob. Agents Chemother. 45 (10), 2733-2739 (2001)
PUBMED 11557462
REFERENCE 2 (bases 1 to 840)
Show all sequences for reference 2
AUTHORS Miller,M.D. and Lamy,P.D.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) Clinical Virology, Gilead Sciences, 333
Lakeside Dr., Foster City, CA 94404, USA
FEATURES Location/Qualifiers
source 1..840
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="D"
/db_xref="taxon:11676"
/country="USA"
/note="tenofovir DF day 35 isolate"
gene <1..>840
/gene="pol"
CDS <1..>840
/gene="pol"
/note="polymerase"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="AAK56949.1"
/db_xref="GI:14210240"
/translation="PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICTEMEKE
GKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKK
KKSVTVLDVGDAYFSVPLHEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTTILEPFRKHNPDIIIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPX
KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASXIYPGIKV
RQLC"
BASE COUNT 331 a 139 c 171 g 195 t 4 other
ORIGIN
1 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaga
61 gttaaacaat ggccattgac agaggagaaa ataaaagcat taatagaaat ttgtacagaa
121 atggaaaagg aagggaaaat ttcaaaaatt gggcctgaga atccatacaa tactccagta
181 tttgccataa agaaaaaaga cagtactaaa tggagaaaat tagtagattt cagagaactt
241 aataagagaa ctcaagactt ttgggaagtc caattaggaa taccacatcc cgcagggtta
301 aaaaagaaaa aatcagthac agtactggat gtgggtgatg catatttttc agttccctta
361 catgaagact tcaggaagta tactgcattt accataccta gtataaacaa tgagacacca
421 ggdattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc
481 caaagtagca tgacaacaat cttagagccc tttagaaaac ataatccaga cataattatc
541 tatcaataca tggatgattt gtatgtagga tcggacttag aaatagggca gcatagaaca
601 aaaatagagg aactgagaca acatctgctg agatggggat tcaccacacc agabaaaaaa
661 catcagaaag aacccccatt cctttggatg ggttatgaac tccatcctga taaatggaca
721 gtacaaccta tagtactgcc agaaaaagac agctggactg ttaatgacat acagaagtta
781 gtgggaaaat taaattgggc aagtnagatt tatccaggga ttaaggtaag gcaattatgt
//
last modified: Tue May 31 10:56 2022