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LOCUS AF366277 1641 bp DNA linear VRL 14-MAY-2001
DEFINITION HIV-1 isolate 1-2 from USA pol polyprotein (pol) gene, partial cds
ACCESSION AF366277
VERSION AF366277.1 GI:14030507
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1641)
Show all sequences for reference 1
AUTHORS Dykes,C., Fox,K., Lloyd,A., Chiulli,M., Morse,E. and Demeter,L.M.
TITLE Impact of clinical reverse transcriptase sequences on the
replication capacity of HIV-1 drug-resistant mutants.
JOURNAL Virology 285 (2), 193-203 (2001)
PUBMED 11437654
REFERENCE 2 (bases 1 to 1641)
Show all sequences for reference 2
AUTHORS Demeter,L.M., Dykes,C., Fox,K., Lloyd,A., Chiulli,M. and Morse,E.
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2001) Medicine-Infectious Diseases Unit,
University of Rochester Medical Center, Box 689, 601 Elmwood Ave.,
Rochester, NY 14642, USA
FEATURES Location/Qualifiers
source 1..1641
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="1-2"
/db_xref="taxon:11676"
/country="USA"
/note="patient 1 treated with delavirdine"
gene <1..>1641
/gene="pol"
CDS <1..>1641
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol polyprotein"
/protein_id="AAK52927.1"
/db_xref="GI:14030508"
/translation="PGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYN
TPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAY
FSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQDSMTKILEPFRK
QNPGIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLMWGFTTPDKKHQKEPPFLWMG
YELHLDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKAL
TEVIPLTREAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFK
NLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWEIWWTEY
WQATWIPEWEFVNTPPLVKLWYQLEKEPMIGAETFYVDGAANRETKLGKAGYVTDRGR
QKVVSLTDTTNQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVSQI
IEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSTGIRKVL"
BASE COUNT 666 a 267 c 354 g 354 t
ORIGIN
1 cccgggatgg atggcccaaa agtgaaacaa tggccattga cagaagaaaa aataaaagca
61 ttaacagaaa tttgtacaga aatggaaaag gaagggaaaa tttcaaaaat tgggcctgaa
121 aatccatata atactccagt atttgccata aagaaaaaag acagtactaa atggagaaaa
181 ttagtagatt tcagagaact taataagaga actcaagact tctgggaagt tcaattagga
241 ataccacatc ccgcagggtt aaaaaagaaa aaatcagtaa cagtattgga tgtgggtgat
301 gcatattttt cagttccatt agataaagac tttaggaagt atactgcatt taccatacct
361 agtataaaca atgagacacc agggattaga taccaataca atgtgcttcc acagggatgg
421 aaaggatcac cagcaatatt ccaagatagc atgacaaaaa tcttagagcc ttttagaaaa
481 caaaatccag gcatagttat ctatcaatac atggatgatt tgtatgtagg atctgactta
541 gaaatagggc agcatagaac aaaaatagag gaactaagac aacatctgtt gatgtgggga
601 tttaccacac cagacaaaaa acatcagaaa gaacctccat tcctttggat ggggtatgaa
661 ctccatcttg ataaatggac agtacagcct atagtgctgc cagaaaaaga cagctggact
721 gtcaatgaca tacagaagtt agtgggaaaa ttgaattggg caagtcagat ttacccaggg
781 attaaagtaa ggcaattatg taaacttctt aggggaacca aggcactaac agaagtaata
841 ccactaacaa gagaagcaga gctagaactg gcagaaaaca gggaaattct aaaagaacca
901 gtacacggag tgtattatga cccatcaaaa gacttaatag cagaaataca gaagcagggg
961 cagggtcaat ggacatatca aatttatcaa gaaccattta aaaatctgaa aacaggaaaa
1021 tatgcaagaa tgaggggtgc ccacactaat gatgtaaaac aattaacaga ggcagtgcaa
1081 aaaataacca cagaaagcat agtaatatgg ggaaagactc ctaaatttaa actacccata
1141 caaaaagaaa catgggagat atggtggaca gagtattggc aagccacctg gattcctgag
1201 tgggaatttg tcaatacccc tcccttagtg aaattatggt accagttaga gaaagaaccc
1261 atgataggag cagagacttt ctatgtagat ggggcagcta acagggagac taaattagga
1321 aaagcaggat atgttactga cagagggaga caaaaagttg tctccctaac tgacacaaca
1381 aatcagaaga ctgagttaca agcaattcat ctagctctac aggattcagg attagaagta
1441 aacatagtga cagactcaca atatgcatta ggaatcattc aagcacaacc agataaaagt
1501 gaatcagagt tagtcagtca aataatagag cagttaataa aaaaggaaaa ggtctacctg
1561 gcatgggtac cagcgcataa aggaattgga ggaaatgaac aggtagataa attagtcagt
1621 actggaatca ggaaagtact a
//
last modified: Tue May 31 10:56 2022