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LOCUS AF357693 1261 bp DNA linear VRL 23-MAY-2002
DEFINITION HIV1 isolate 503258b123097 from USA pol protein (pol) gene, partial
cds
ACCESSION AF357693
VERSION AF357693.1 GI:13958890
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1261)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
Nachman,S. and Palumbo,P.
TITLE Analysis of human immunodeficiency virus type 1 drug resistance in
children receiving nucleoside analogue reverse-transcriptase
inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
AIDS Clinical Trials Group 377)
JOURNAL J. Infect. Dis. 183 (12), 1732-1738 (2001)
PUBMED 11372025
REFERENCE 2 (bases 1 to 1261)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
Johnson,G. and Palumbo,P.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
02115-6017, USA
FEATURES Location/Qualifiers
source 1..1261
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="503258b123097"
/db_xref="taxon:11676"
/country="USA"
/note="subtype: B"
gene <1..>1261
/gene="pol"
CDS <1..>1261
/gene="pol"
/note="protease/reverse transcriptase region"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAK51004.1"
/db_xref="GI:13958891"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQILVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKVVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
MVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQXIXLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCXLLRGAKALTEVI
PLTKEAELELAENREILKEPVHGVYYDP"
BASE COUNT 496 a 208 c 261 g 288 t 8 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctc gtcacaataa aaataggagg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aggaaatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagatacttg tagaaatctg tggacataaa gctataggta cagtrttaat aggacctaca
241 cctgtcaaca taattggaag aaayctgttg actcagattg gttgcacttt aaattttccc
301 atcagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatctg tacagaaatg
421 gaaaaggaag graaaatctc aaaaattggg cctgaaaatc catataatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaagtag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaagt cagtgacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagaattca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt acttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat ggttatctac
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaac taagacaaca tttgttgagg tggggattta ccacaccaga caaaaaacat
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 caayctatar tgctgccaga caaagacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtraaaca attatgtara
1141 ctccttaggg gagcmaaggc actaacagaa gtaataccac taacaaaaga agcagagcta
1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca
1261 t
//
last modified: Tue May 31 10:56 2022