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LOCUS	    AF357693		    1261 bp    DNA     linear	VRL 23-MAY-2002
DEFINITION  HIV1 isolate 503258b123097 from USA pol protein (pol) gene, partial
	    cds
ACCESSION   AF357693
VERSION     AF357693.1 GI:13958890
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1261)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
	    Nachman,S. and Palumbo,P.
  TITLE     Analysis of human immunodeficiency virus type 1 drug resistance in
	    children receiving nucleoside analogue reverse-transcriptase
	    inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
	    AIDS Clinical Trials Group 377)
  JOURNAL   J. Infect. Dis. 183 (12), 1732-1738 (2001)
  PUBMED    11372025
REFERENCE   2 (bases 1 to 1261)
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
	    Johnson,G. and Palumbo,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
	    Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
	    02115-6017, USA
FEATURES             Location/Qualifiers
     source	     1..1261
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="503258b123097"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>1261
		     /gene="pol"
     CDS	     <1..>1261
		     /gene="pol"
		     /note="protease/reverse transcriptase region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAK51004.1"
		     /db_xref="GI:13958891"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQILVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKVVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     MVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQXIXLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCXLLRGAKALTEVI
		     PLTKEAELELAENREILKEPVHGVYYDP"
BASE COUNT	496 a	 208 c	  261 g    288 t      8 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtcacaataa aaataggagg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aggaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagatacttg tagaaatctg tggacataaa gctataggta cagtrttaat aggacctaca 
     241 cctgtcaaca taattggaag aaayctgttg actcagattg gttgcacttt aaattttccc 
     301 atcagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatctg tacagaaatg 
     421 gaaaaggaag graaaatctc aaaaattggg cctgaaaatc catataatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaagtag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa 
     601 aagaaaaagt cagtgacagt actggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt acttccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat ggttatctac 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa 
     901 atagaggaac taagacaaca tttgttgagg tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 caayctatar tgctgccaga caaagacagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtraaaca attatgtara 
    1141 ctccttaggg gagcmaaggc actaacagaa gtaataccac taacaaaaga agcagagcta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca 
    1261 t
//
last modified: Tue May 31 10:56 2022


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