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LOCUS AF357676 1269 bp DNA linear VRL 23-MAY-2002
DEFINITION HIV1 isolate 502437C021698 from USA pol protein (pol) gene, partial
cds
ACCESSION AF357676
VERSION AF357676.1 GI:13958856
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1269)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
Nachman,S. and Palumbo,P.
TITLE Analysis of human immunodeficiency virus type 1 drug resistance in
children receiving nucleoside analogue reverse-transcriptase
inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
AIDS Clinical Trials Group 377)
JOURNAL J. Infect. Dis. 183 (12), 1732-1738 (2001)
PUBMED 11372025
REFERENCE 2 (bases 1 to 1269)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
Johnson,G. and Palumbo,P.
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
02115-6017, USA
FEATURES Location/Qualifiers
source 1..1269
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="502437C021698"
/db_xref="taxon:11676"
/country="USA"
/note="subtype: B"
gene <1..>1269
/gene="pol"
CDS <1..>1269
/gene="pol"
/note="protease/reverse transcriptase region"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAK50987.1"
/db_xref="GI:13958857"
/translation="PQITLWQRPLVTVXIGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQIXXEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
VVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVV
PLTREAELELAENREILKEPVHGVYYDPSKE"
BASE COUNT 494 a 207 c 272 g 284 t 12 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacagtaa rgataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa yttgccagga
121 agatggaaac caaaaatgat agggggaatt ggagggttta tcaaagtaag acagtatgat
181 cagatacycr tagaaatytg tggacataaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gatgcacttt aaattttccc
301 attagtccta ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga rgaaaaaata aaagcattag tagaaatctg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagaaracyc aggacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat ayttttcagt tcccttagat
661 aaagaattca ggaagtatac tgcatttacc atacctagta caaacaatga racaccaggg
721 attagatatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatattycaa
781 agtagcatga caaaaatctt ggagcctttt agaaaacaga atccagatgt agttatctat
841 caatacatgg atgatttata tgtaggatct gacctagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgaag tgggggttta ccacaccaga taaaaaacat
961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctatag agctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtaaggca attatgtaaa
1141 ctccttaggg gaaccaaggc actaacagaa gtagtaccac taacaagaga rgcagagcta
1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca
1261 tcaaaagaa
//
last modified: Tue May 31 10:56 2022