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LOCUS	    AF357676		    1269 bp    DNA     linear	VRL 23-MAY-2002
DEFINITION  HIV1 isolate 502437C021698 from USA pol protein (pol) gene, partial
	    cds
ACCESSION   AF357676
VERSION     AF357676.1 GI:13958856
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1269)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
	    Nachman,S. and Palumbo,P.
  TITLE     Analysis of human immunodeficiency virus type 1 drug resistance in
	    children receiving nucleoside analogue reverse-transcriptase
	    inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
	    AIDS Clinical Trials Group 377)
  JOURNAL   J. Infect. Dis. 183 (12), 1732-1738 (2001)
  PUBMED    11372025
REFERENCE   2 (bases 1 to 1269)
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
	    Johnson,G. and Palumbo,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
	    Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
	    02115-6017, USA
FEATURES             Location/Qualifiers
     source	     1..1269
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="502437C021698"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>1269
		     /gene="pol"
     CDS	     <1..>1269
		     /gene="pol"
		     /note="protease/reverse transcriptase region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAK50987.1"
		     /db_xref="GI:13958857"
		     /translation="PQITLWQRPLVTVXIGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQIXXEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     VVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVV
		     PLTREAELELAENREILKEPVHGVYYDPSKE"
BASE COUNT	494 a	 207 c	  272 g    284 t     12 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacagtaa rgataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa yttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggagggttta tcaaagtaag acagtatgat 
     181 cagatacycr tagaaatytg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gatgcacttt aaattttccc 
     301 attagtccta ttgagactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga rgaaaaaata aaagcattag tagaaatctg tacagaaatg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagaaracyc aggacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat ayttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcatttacc atacctagta caaacaatga racaccaggg 
     721 attagatatc agtacaatgt gctcccacag ggatggaaag gatcaccagc aatattycaa 
     781 agtagcatga caaaaatctt ggagcctttt agaaaacaga atccagatgt agttatctat 
     841 caatacatgg atgatttata tgtaggatct gacctagaaa tagggcagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgttgaag tgggggttta ccacaccaga taaaaaacat 
     961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatag agctgccaga aaaagatagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcagatttac ccagggatta aagtaaggca attatgtaaa 
    1141 ctccttaggg gaaccaaggc actaacagaa gtagtaccac taacaagaga rgcagagcta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca 
    1261 tcaaaagaa
//
last modified: Tue May 31 10:56 2022


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