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LOCUS	    AF357627		    1269 bp    DNA     linear	VRL 23-MAY-2002
DEFINITION  HIV1 isolate 400192l060998 from USA pol protein (pol) gene, partial
	    cds
ACCESSION   AF357627
VERSION     AF357627.1 GI:13958758
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1269)
            Show all sequences for reference 1
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Wiznia,A., Johnson,G.,
	    Nachman,S. and Palumbo,P.
  TITLE     Analysis of human immunodeficiency virus type 1 drug resistance in
	    children receiving nucleoside analogue reverse-transcriptase
	    inhibitors plus nevirapine, nelfinavir, or ritonavir (Pediatric
	    AIDS Clinical Trials Group 377)
  JOURNAL   J. Infect. Dis. 183 (12), 1732-1738 (2001)
  PUBMED    11372025
REFERENCE   2 (bases 1 to 1269)
            Show all sequences for reference 2
  AUTHORS   Eshleman,S.H., Krogstad,P., Jackson,J.B., Wang,Y.G., Lee,S.,
	    Wei,L.-J., Cunningham,S., Wantman,M., Nachman,S., Wiznia,A.,
	    Johnson,G. and Palumbo,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2001) Center for Biostatistics in AIDS Research,
	    Harvard School of Public Health, 651 Huntington Avenue, Boston, MA
	    02115-6017, USA
FEATURES             Location/Qualifiers
     source	     1..1269
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="400192l060998"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>1269
		     /gene="pol"
     CDS	     <1..>1269
		     /gene="pol"
		     /note="protease/reverse transcriptase region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAK50938.1"
		     /db_xref="GI:13958759"
		     /translation="PQITLWQRPLVTIKIEGQLKEALLDTGADDTVLEEMNLPGKWKP
		     KMIGGIGGFIKVRQYDQVRIDICGHKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKXSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNESPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPD
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIELPEKDXWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVI
		     PLTKEAELELAENREILKEPVHGVYYDPSKE"
BASE COUNT	498 a	 207 c	  266 g    288 t     10 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agatagaggg acaactaaag 
      61 gaagcactat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 caggtacgca tagacatctg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag gaatatgttg acccagattg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatctg tacagaaatg 
     421 gaaaaggaag graaaatttc aaaaattggg cctgaaaatc catacaatac tccagtgttt 
     481 gccataaaga aaaaagacag tactaagtgg agaaaattag tagayttcag agaacttaat 
     541 aagaaaactc aagatttctg ggaagttcaa ttgggaatac cacatccygc agggttaaaa 
     601 aagaaaarat cagtaacagt actggatgtg ggtgatgcat acttttcagt tcccttagat 
     661 aaagaattca ggaagtatac tgcatttacc atacctagta taaataatga gtcaccaggr 
     721 attagatatc agtacaatgt gcttccmcag ggatggaaag ggtcaccagc aatattccaa 
     781 tgtagtatga caaaaatctt agagcctttt agaaaacaaa atccagacat agtaatctat 
     841 caatacatgg atgatytgta tgtaggatct gacttagaaa tagggcagca tagagcaaag 
     901 atagaggaac tgagacarca tctgttaaag tggggattta ccacaccaga caaaaarcat 
     961 cagaaagaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctatag agctgccaga aaaagacagm tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcagatctac gcaggaatta aagtaaagca attatgtaaa 
    1141 ctccttaggg gagccaaggc actaacagaa gtaattcccc taacaaaaga agcagagcta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgaccca 
    1261 tcaaaagaa
//
last modified: Tue May 31 10:56 2022


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