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LOCUS AF310663 536 bp RNA linear VRL 29-JUN-2001
DEFINITION HIV-1 isolate M087 from Zimbabwe envelope glycoprotein (env) gene,
partial cds
ACCESSION AF310663
VERSION AF310663.1 GI:12247503
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 536)
Show all sequences for reference 1
AUTHORS Guevara,H., Johnston,E., Zijenah,L., Tobaiwa,O., Mason,P.,
Contag,C., Mahomed,K., Hendry,M. and Katzenstein,D.
TITLE Prenatal transmission of subtype C HIV-1 in Zimbabwe: HIV-1 RNA and
DNA in maternal and cord blood
JOURNAL J. Acquir. Immune Defic. Syndr. 25 (5), 390-397 (2000)
PUBMED 11141238
REFERENCE 2 (bases 1 to 536)
Show all sequences for reference 2
AUTHORS Johnston,E.R., Guevara,H., Zijenah,L., Tobaiwa,O., Mason,P.,
Contag,C., Mahomed,K., Hendry,M. and Katzenstein,D.
TITLE Direct Submission
JOURNAL Submitted (03-OCT-2000) Med. Infectious Diseases, Stanford
University, 300 Pasteur Dr., Rm. S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..536
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="M087"
/db_xref="taxon:11676"
/country="Zimbabwe"
/note="isolated from maternal blood plasma subtype: C"
gene <1..>536
/gene="env"
CDS <1..>536
/gene="env"
/note="HXB2"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAG49913.1"
/db_xref="GI:12247504"
/translation="EIVCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNISRXX
WXSTLQQVGRXLEEXFNKTIXFAPSSGGDPEITMHXFNCRGEFFYCNTTKLFNSTYXS
NDTESNXTITLPCRIXQIINMWXEVGRAMYAPPIAGNITCKSNITGLLLVHDGGXTND
TNNTXTXXPGGGNMRDNW"
BASE COUNT 214 a 89 c 99 g 114 t 20 other
ORIGIN
1 tagaaattgt gtgtacaaga cccaacaata atacaagaaa aagtataagg ataggaccag
61 gacaagcatt ctatgcaaca ggcgacataa taggagatat aagacaagca cattgtaaca
121 ttagtagana gnnctggnat agcacnttac aacaggtngg taganaatta gaagaacnct
181 tcaataaaac aataanattt gcaccatcct caggagggga cccagaaatt acaatgcata
241 nttttaattg tagaggagaa tttttctatt gcaatacaac aaaactgttt aatagtacat
301 acatntctaa tgatacagag agtaatgnaa ccatcacact cccatgcaga atanancaaa
361 ttataaacat gtggcangag gtaggacgag caatgtatgc ccctcccatt gcaggaaaca
421 taacatgtaa atcaaatatc acaggactac tattagtaca tgatggaggc nncacaaatg
481 acacaaataa cacanagaca ttnanacctg gaggaggaaa tatgagggac aattgg
//
last modified: Tue May 31 10:56 2022