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LOCUS	    AF292729		     538 bp    RNA     linear	VRL 24-OCT-2000
DEFINITION  HIV-1 clone C53 from USA, protease (pol) gene, partial cds
ACCESSION   AF292729
VERSION     AF292729.1 GI:10953286
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 538)
            Show all sequences for reference 1
  AUTHORS   Martinez-Picado,J., DePasquale,M.P., Kartsonis,N., Hanna,G.J.,
	    Wong,J., Finzi,D., Rosenberg,E., Gunthard,H.F., Sutton,L.,
	    Savara,A., Petropoulos,C.J., Hellmann,N., Walker,B.D.,
	    Richman,D.D., Siliciano,R. and D'Aquila,R.T.
  TITLE     Antiretroviral resistance during successful therapy of HIV type 1
	    infection
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 97 (20), 10948-10953 (2000)
  PUBMED    11005867
REFERENCE   2 (bases 1 to 538)
            Show all sequences for reference 2
  AUTHORS   Martinez-Picado,J., DePasquale,M.P., Kartsonis,N., Hanna,G.J.,
	    Wong,J., Finzi,D., Rosenberg,E., Gunthard,H.F., Sutton,L.,
	    Savara,A., Petropoulos,C.J., Hellmann,N., Walker,B.D.,
	    Richman,D.D., Siliciano,R. and D'Aquila,R.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-2000) Infectious Disease Unit, Massachusetts
	    General Hospital, 149 13th Street, 5th Floor, Charlestown, MA
	    02129, USA
FEATURES             Location/Qualifiers
     source	     1..538
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient C"
		     /db_xref="taxon:11676"
		     /clone="C53"
		     /country="USA"
		     /note="from latent reservoir"
     gene	     <1..>538
		     /gene="pol"
     CDS	     <1..>538
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAG25312.1"
		     /db_xref="GI:10953287"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGTGGFIKVRQYDQIVIEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKXKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFREL"
BASE COUNT	216 a	  80 c	  112 g    129 t      1 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag 
      61 gaagccttat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaact ggaggtttta tcaaagtaag acagtatgat 
     181 cagatagtca tagaaatctg tggacataaa gctataggta cagtgttaat aggacctaca 
     241 cctgttaaca taattggaag aaatctgttg actcagattg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttwaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgactga agaaaaaata aaagcattag tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaactta
//
last modified: Tue May 31 10:56 2022


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