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LOCUS AF292729 538 bp RNA linear VRL 24-OCT-2000
DEFINITION HIV-1 clone C53 from USA, protease (pol) gene, partial cds
ACCESSION AF292729
VERSION AF292729.1 GI:10953286
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 538)
Show all sequences for reference 1
AUTHORS Martinez-Picado,J., DePasquale,M.P., Kartsonis,N., Hanna,G.J.,
Wong,J., Finzi,D., Rosenberg,E., Gunthard,H.F., Sutton,L.,
Savara,A., Petropoulos,C.J., Hellmann,N., Walker,B.D.,
Richman,D.D., Siliciano,R. and D'Aquila,R.T.
TITLE Antiretroviral resistance during successful therapy of HIV type 1
infection
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (20), 10948-10953 (2000)
PUBMED 11005867
REFERENCE 2 (bases 1 to 538)
Show all sequences for reference 2
AUTHORS Martinez-Picado,J., DePasquale,M.P., Kartsonis,N., Hanna,G.J.,
Wong,J., Finzi,D., Rosenberg,E., Gunthard,H.F., Sutton,L.,
Savara,A., Petropoulos,C.J., Hellmann,N., Walker,B.D.,
Richman,D.D., Siliciano,R. and D'Aquila,R.T.
TITLE Direct Submission
JOURNAL Submitted (03-AUG-2000) Infectious Disease Unit, Massachusetts
General Hospital, 149 13th Street, 5th Floor, Charlestown, MA
02129, USA
FEATURES Location/Qualifiers
source 1..538
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="patient C"
/db_xref="taxon:11676"
/clone="C53"
/country="USA"
/note="from latent reservoir"
gene <1..>538
/gene="pol"
CDS <1..>538
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAG25312.1"
/db_xref="GI:10953287"
/translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGTGGFIKVRQYDQIVIEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKXKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFREL"
BASE COUNT 216 a 80 c 112 g 129 t 1 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag
61 gaagccttat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaact ggaggtttta tcaaagtaag acagtatgat
181 cagatagtca tagaaatctg tggacataaa gctataggta cagtgttaat aggacctaca
241 cctgttaaca taattggaag aaatctgttg actcagattg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttwaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgactga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaactta
//
last modified: Tue May 31 10:56 2022