HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF273196		     563 bp    DNA     linear	VRL 19-NOV-2001
DEFINITION  HIV-1 isolate 99KTG9 from South Korea pol protein (pol) gene,
	    partial cds
ACCESSION   AF273196
VERSION     AF273196.1 GI:8925679
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 563)
            Show all sequences for reference 1
  AUTHORS   Sung,H., Foley,B.T., Bae,I.G., Chi,H.S. and Cho,Y.K.
  TITLE     Phylogenetic analysis of reverse transcriptase in antiretroviral
	    drug-naive Korean HIV type 1 patients
  JOURNAL   AIDS Res. Hum. Retroviruses 17 (16), 1549-1554 (2001)
  PUBMED    11709099
REFERENCE   2 (bases 1 to 563)
            Show all sequences for reference 2
  AUTHORS   Cho,Y.K., Lee,H.J. and Sung,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2000) Microbiology, University of Ulsan College
	    of Medicine, 388-1 Poongnap-dong, Songpa-ku, Seoul 138-040, South
	    Korea
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Cho,Y.K., Sung,H., Lee,H.J., Joo,C.H. and Cho,G.J.
  TITLE     Long-term intake of Korean red ginseng in HIV-1-infected patients:
	    development of resistance mutation to zidovudine is delayed
  JOURNAL   Int. Immunopharmacol. 1 (7), 1295-1305 (2001)
  PUBMED    11460310
FEATURES             Location/Qualifiers
     source	     1..563
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="99KTG9"
		     /db_xref="taxon:11676"
		     /country="South Korea"
     gene	     <1..>563
		     /gene="pol"
     CDS	     <1..>563
		     /gene="pol"
		     /codon_start="2"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAF81579.1"
		     /db_xref="GI:8925680"
		     /translation="LVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDF
		     RELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDIGDAYFSVPLDEDFRKYTAFTIPSV
		     NNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVIYQYMDDLYVGSDL
		     EIGQHRIKIEELRQHLLKWGFSTPDKK"
BASE COUNT	230 a	  86 c	  111 g    136 t
ORIGIN
       1 attagtagaa atttgtacag aaatggaaaa ggaaggaaaa atttcaaaaa ttgggcctga 
      61 aaatccatat aatactccag tatttgccat aaagaaaaaa gacagtacta aatggagaaa 
     121 attagtagat ttcagagaac ttaataagag aactcaagac ttctgggaag ttcaattagg 
     181 aataccacat ccagcagggt taaaaaagaa aaaatcagta acagtactag atataggtga 
     241 tgcatatttt tcagttccct tagatgaaga cttcaggaag tatactgcat ttaccatacc 
     301 tagtgtaaac aatgagacac cagggattag atatcagtac aatgtgcttc cacaggggtg 
     361 gaaaggatca ccagcgatat tccaaagtag catgacaaga atcttagagc cttttagaaa 
     421 gcaaaatcca gacatagtca tctatcaata catggatgat ttatatgtag gatctgactt 
     481 agaaatagga cagcatagaa taaaaataga ggaactgaga caacatctgt tgaagtgggg 
     541 attttccaca ccagacaaaa aac
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health