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LOCUS	    AF254713		     726 bp    DNA     linear	VRL 15-MAR-2002
DEFINITION  HIV-1 clone NT50.1/ from Tanzania 5' long terminal repeat, complete
	    sequence
ACCESSION   AF254713
VERSION     AF254713.1 GI:13897607
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 726)
            Show all sequences for reference 1
  AUTHORS   Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
	    Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
	    Essex,M.
  TITLE     HIV-1 LTR subtype and perinatal transmission
  JOURNAL   Virology 287 (2), 261-265 (2001)
  PUBMED    11531404
REFERENCE   2 (bases 1 to 726)
            Show all sequences for reference 2
  AUTHORS   Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
	    Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
	    Essex,M.
  TITLE     The long terminal repeat of the human immunodeficiency virus type 1
	    contains determinants associated with perinatal transmission
  JOURNAL   Unpublished
REFERENCE   3 (bases 1 to 726)
            Show all sequences for reference 3
  AUTHORS   Blackard,J.T., Renjifo,B., Fawzi,W., Hertzmark,E., Msamanga,G.,
	    Mwakagile,D., Hunter,D., Spiegelman,D., Sharghi,N., Kagoma,C. and
	    Essex,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2000) Department of Immunology and Infectious
	    Diseases, Harvard AIDS Institute and the Harvard School of Public
	    Health, 651 Huntington Avenue, Boston, MA 02445, USA
COMMENT     Sample date is approximate; study recruitment dates were 4/1995 -
	    7/1997, and continued 18 mos post-recruitment (Fawzi et al, 1999;
	    PMID 10839660).
FEATURES             Location/Qualifiers
     source	     1..726
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /db_xref="taxon:11676"
		     /clone="NT50.1/"
		     /country="Tanzania"
		     /note="isolated from peripheral blood mononuclear cells"
     LTR	     1..726
		     /note="5'' long terminal repeat (U3 through 5''UTR)"
BASE COUNT	188 a	 168 c	  215 g    155 t
ORIGIN
       1 caaggatcct tccctgattg gcagaactac acaccaggac caggggtcag atatccactg 
      61 acctttggat ggtgcttcaa gctagtgcca gttgacccaa aggaagtgga agaggccaat 
     121 gaaggagaga acaactgttt gctacatccc atgagcctgc atggaatgga ggatacagac 
     181 agagaagttt taaagtggaa gtttgacagc agcctggcac gcagacacat ggcccgcgag 
     241 ctacatccgg agtattacaa agactgctga cacagaaggg actttccgct gggactttcc 
     301 actggggcgt aacaggagga gtgttctggg cgggactggg agtggccaac cttcagatgc 
     361 tgcatataag cagctgcttt tcgcccgtac tgggtctctc taggtggacc agatctgagc 
     421 ctgggagctc tctggctgtc tagggaaccc actgcttaag cctcaataaa gcttgccttg 
     481 agtgctcaaa gtagtgtgtg cccgtctgtt gtgtgactct ggtaactaga gatccctcag 
     541 acccagtttg tcagtgtgga aaatctctag cagtggcgcc cgaacaggga cttgaaagcg 
     601 aaagtaagac cagaggagat ctctcgacgc aggactcggc ttgctgaagt gcacacagca 
     661 agaggcgaga gcggcgactg gtgagtacgc caatttttat ttgactagcg gaggctagaa 
     721 ggagag
//
last modified: Tue May 31 10:56 2022


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