View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AF197174 1017 bp DNA linear VRL 06-FEB-2002
DEFINITION HIV-1 isolate GO3566 from United Kingdom pol protein (pol) gene,
partial cds
ACCESSION AF197174
VERSION AF197174.1 GI:6708235
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1017)
Show all sequences for reference 1
AUTHORS Devereux,H.L., Emery,V.C., Johnson,M.A. and Loveday,C.
TITLE Replicative fitness in vivo of HIV-1 variants with multiple drug
resistance-associated mutations
JOURNAL J. Med. Virol. 65 (2), 218-224 (2001)
PUBMED 11536226
REFERENCE 2 (bases 1 to 1017)
Show all sequences for reference 2
AUTHORS Devereux,H.L., Loveday,C., Johnson,M.A. and Emery,V.C.
TITLE Direct Submission
JOURNAL Submitted (22-OCT-1999) Retrovirology, Royal Free and University
College Medical School, Rowland Hill Street, London NW3 2PF, United
Kingdom
FEATURES Location/Qualifiers
source 1..1017
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="GO3566"
/db_xref="taxon:11676"
/country="United Kingdom"
gene <1..>1017
/gene="pol"
CDS <1..>1017
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAF25852.1"
/db_xref="GI:6708262"
/translation="PQITLWQRPVVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKTIGTVLXGPTPVNIIGRNLMTQIGCTLNFXXX
XXXXXXXKLKPGMDGPXVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKNSXRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPG
IVIYQYMDDLYVGSDLEIEQHRTKIEELRSHLLQWGFFTPDQKHQKEPPFLWMGYELH
PDKWT"
BASE COUNT 388 a 156 c 202 g 234 t 37 other
ORIGIN
1 cctcagatca ctctttggca acgacccgtc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttaccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccta tagaaatttg tggacataaa actataggta cagtmttart aggacctaca
241 cctgtcaaca taattggaag aaacytgatg acccagattg gttgcacttt aaattttnnn
301 nnnnnnnnnn nnnnnnnnnn nnnnnnnaaa ttaaagccag gaatggatgg cccaaragtt
361 aagcaatggc cattgacaga ggaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac gccagtattt
481 gctataaaga agaaraacag trmtagatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttgggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagatttca ggaagtatac tgcatttacc atacccagta taaacaatga gacaccaggg
721 attagatatc agtacaatgt acttccacaa ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccaggcat agtaatttat
841 caatacatgg atgatttgta tgtaggatct gacctagaaa tagaacagca tagaacaaaa
901 atagaggaac taagaagcca tctgttacaa tgggggtttt tcacaccaga ccagaaacat
961 cagaaagaac ctccatttct ttggatgggc tatgaactcc atcctgataa atggaca
//
last modified: Tue May 31 10:56 2022