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LOCUS	    AF181129		     972 bp    DNA     linear	VRL 18-NOV-2004
DEFINITION  HIV-1 from United Kingdom isolate Ca5132 pol polyprotein (pol)
	    gene, partial cds
ACCESSION   AF181129
VERSION     AF181129.1 GI:6019209
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 972)
            Show all sequences for reference 1
  AUTHORS   Devereux,H.L., Youle,M., Johnson,M.A. and Loveday,C.
  TITLE     Rapid decline in detectability of HIV-1 drug resistance mutations
	    after stopping therapy.
  JOURNAL   AIDS 13 (18), F123-7 (1999)
  PUBMED    10630517
REFERENCE   2 (bases 1 to 972)
            Show all sequences for reference 2
  AUTHORS   Devereux,H.L., Youle,M., Johnson,M.A. and Loveday,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-1999) Retrovirology, Royal Free and University
	    College Medical School, Rowland Hill Street, London, London NW3
	    2PF, UK
FEATURES             Location/Qualifiers
     source	     1..972
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="Ca5132"
		     /db_xref="taxon:11676"
		     /country="United Kingdom"
		     /note="subtype: B"
     gene	     <1..>972
		     /gene="pol"
     CDS	     <1..>972
		     /gene="pol"
		     /note="protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol polyprotein"
		     /protein_id="AAF01974.1"
		     /db_xref="GI:6019257"
		     /translation="PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEDMDLPGKWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHKTIGTVLIGPTPVNIIGXNLLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALLEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPSGLXKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     IVIYQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEP"
BASE COUNT	389 a	 160 c	  194 g    226 t      3 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctt gtcacaataa ggataggggg gcaactaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgga tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgac 
     181 cagataccaa tagaaatttg tggacataaa actataggta cagtattaat aggacctaca 
     241 cctgtcaaca taattggaag naatctgttg actcagcttg ggtgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattat tagaaatttg tacagaaatg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaaattcaa ttaggaatac cacatccctc agggttaaan 
     601 aagaaaaaat cagtaacagt actngatgtg ggtgatgcat atttctcagt tcccttagac 
     661 aaagacttca gaaagtatac tgcatttacc atacctagta taaacaatga aacaccaggg 
     721 attagatacc agtacaatgt gctgccacag ggatggaagg gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatatat 
     841 caatacgtgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgttgaag tgggggttta ccacaccaga caaaaaacat 
     961 cagaaagaac ct
//
last modified: Tue May 31 10:56 2022


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