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LOCUS AF181129 972 bp DNA linear VRL 18-NOV-2004
DEFINITION HIV-1 from United Kingdom isolate Ca5132 pol polyprotein (pol)
gene, partial cds
ACCESSION AF181129
VERSION AF181129.1 GI:6019209
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 972)
Show all sequences for reference 1
AUTHORS Devereux,H.L., Youle,M., Johnson,M.A. and Loveday,C.
TITLE Rapid decline in detectability of HIV-1 drug resistance mutations
after stopping therapy.
JOURNAL AIDS 13 (18), F123-7 (1999)
PUBMED 10630517
REFERENCE 2 (bases 1 to 972)
Show all sequences for reference 2
AUTHORS Devereux,H.L., Youle,M., Johnson,M.A. and Loveday,C.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-1999) Retrovirology, Royal Free and University
College Medical School, Rowland Hill Street, London, London NW3
2PF, UK
FEATURES Location/Qualifiers
source 1..972
/organism="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="Ca5132"
/db_xref="taxon:11676"
/country="United Kingdom"
/note="subtype: B"
gene <1..>972
/gene="pol"
CDS <1..>972
/gene="pol"
/note="protease and reverse transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol polyprotein"
/protein_id="AAF01974.1"
/db_xref="GI:6019257"
/translation="PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEDMDLPGKWKP
KMIGGIGGFIKVRQYDQIPIEICGHKTIGTVLIGPTPVNIIGXNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALLEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPSGLXKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEP"
BASE COUNT 389 a 160 c 194 g 226 t 3 other
ORIGIN
1 cctcagatca ctctttggca acgacccctt gtcacaataa ggataggggg gcaactaaaa
61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgga tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgac
181 cagataccaa tagaaatttg tggacataaa actataggta cagtattaat aggacctaca
241 cctgtcaaca taattggaag naatctgttg actcagcttg ggtgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattat tagaaatttg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaaattcaa ttaggaatac cacatccctc agggttaaan
601 aagaaaaaat cagtaacagt actngatgtg ggtgatgcat atttctcagt tcccttagac
661 aaagacttca gaaagtatac tgcatttacc atacctagta taaacaatga aacaccaggg
721 attagatacc agtacaatgt gctgccacag ggatggaagg gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatatat
841 caatacgtgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgaag tgggggttta ccacaccaga caaaaaacat
961 cagaaagaac ct
//
last modified: Tue May 31 10:56 2022