View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AF085135 297 bp RNA linear VRL 13-APR-2001
DEFINITION HIV-1 isolate PCCPROT50 from USA, protease (pol) gene, partial cds
ACCESSION AF085135
VERSION AF085135.1 GI:6179790
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
Katzenstein,D., Merigan,T.C. and Efron,B.
TITLE HIV-1 genotypic resistance patterns predict response to
saquinavir-ritonavir therapy in patients in whom previous protease
inhibitor therapy had failed
JOURNAL Ann. Intern. Med. 131 (11), 813-821 (1999)
PUBMED 10610625
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
Hsu,P.T., Merigan,T.C. and Efron,B.
TITLE Direct Submission
JOURNAL Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="PCCPROT50"
/db_xref="taxon:11676"
/country="USA"
/note="AZT, DDI, 3TC, D4T, SQV, IDV, NVP"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAF05677.1"
/db_xref="GI:6179844"
/translation="PQITLWQRPLXTIKIGGQLIEALLDTGADDTVLEEMDLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKVISTVLVGPTPVNVIGRNLMTQIGCTLNF"
BASE COUNT 105 a 47 c 70 g 74 t 1 other
ORIGIN
1 cctcagatca ctctttggca acgacccctc gwcacaataa agataggggg gcaactaata
61 gaagctctat tagatacagg agcagatgat acagtattag aagagatgga tttgccaggg
121 aggtggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccca tagaaatctg tggacataaa gttataagta cagtattagt aggacctaca
241 cctgtcaacg taattggaag aaatctgatg actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022