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LOCUS	    AF085135		     297 bp    RNA     linear	VRL 13-APR-2001
DEFINITION  HIV-1 isolate PCCPROT50 from USA, protease (pol) gene, partial cds
ACCESSION   AF085135
VERSION     AF085135.1 GI:6179790
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
	    Katzenstein,D., Merigan,T.C. and Efron,B.
  TITLE     HIV-1 genotypic resistance patterns predict response to
	    saquinavir-ritonavir therapy in patients in whom previous protease
	    inhibitor therapy had failed
  JOURNAL   Ann. Intern. Med. 131 (11), 813-821 (1999)
  PUBMED    10610625
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
	    Hsu,P.T., Merigan,T.C. and Efron,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
	    University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="PCCPROT50"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="AZT, DDI, 3TC, D4T, SQV, IDV, NVP"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAF05677.1"
		     /db_xref="GI:6179844"
		     /translation="PQITLWQRPLXTIKIGGQLIEALLDTGADDTVLEEMDLPGRWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHKVISTVLVGPTPVNVIGRNLMTQIGCTLNF"
BASE COUNT	105 a	  47 c	   70 g     74 t      1 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gwcacaataa agataggggg gcaactaata 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagagatgga tttgccaggg 
     121 aggtggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccca tagaaatctg tggacataaa gttataagta cagtattagt aggacctaca 
     241 cctgtcaacg taattggaag aaatctgatg actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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