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LOCUS AF085109 297 bp RNA linear VRL 13-APR-2001
DEFINITION HIV-1 isolate PCCPROT24 from USA, protease (pol) gene, partial cds
ACCESSION AF085109
VERSION AF085109.1 GI:6179764
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
Katzenstein,D., Merigan,T.C. and Efron,B.
TITLE HIV-1 genotypic resistance patterns predict response to
saquinavir-ritonavir therapy in patients in whom previous protease
inhibitor therapy had failed
JOURNAL Ann. Intern. Med. 131 (11), 813-821 (1999)
PUBMED 10610625
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
Hsu,P.T., Merigan,T.C. and Efron,B.
TITLE Direct Submission
JOURNAL Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="PCCPROT24"
/db_xref="taxon:11676"
/country="USA"
/note="AZT, DDC, D4T, 3TC, SQV, IDV, NFV"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAF05651.1"
/db_xref="GI:6179818"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADNTVLEDINLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT 110 a 46 c 65 g 75 t 1 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctt gtcacaataa aggtaggggg gcaactaaag
61 gaagctctat tagatacagg agcagataat acagtattag aagacataaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagataccya tagaaatatg tggacataaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022