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LOCUS	    AF085108		     297 bp    RNA     linear	VRL 13-APR-2001
DEFINITION  HIV-1 isolate PCCPROT23 from USA, protease (pol) gene, partial cds
ACCESSION   AF085108
VERSION     AF085108.1 GI:6179763
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
	    Katzenstein,D., Merigan,T.C. and Efron,B.
  TITLE     HIV-1 genotypic resistance patterns predict response to
	    saquinavir-ritonavir therapy in patients in whom previous protease
	    inhibitor therapy had failed
  JOURNAL   Ann. Intern. Med. 131 (11), 813-821 (1999)
  PUBMED    10610625
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
	    Hsu,P.T., Merigan,T.C. and Efron,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
	    University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="PCCPROT23"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="AZT, DDI, D4T, DDC, SQV, IDV"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAF05650.1"
		     /db_xref="GI:6179817"
		     /translation="PQITLWQRPIVTIKIGGQLREALLDTGADDTVLEDIDLPGRWKP
		     KMIVGIGGFTKVRQYDQVPIEICGHKVIGTVLIGPTPANIIGRNLLTQLGCTLNF"
BASE COUNT	108 a	  51 c	   65 g     73 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccatc gtcacaataa agataggggg gcaactaagg 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacataga tttaccagga 
     121 agatggaaac caaaaatgat agtgggaatt ggaggtttta ccaaagtaag acagtatgat 
     181 caggtaccca tagaaatctg tggacataaa gttataggta cagtattaat aggacctaca 
     241 cctgccaaca taattggaag aaatctgttg actcagcttg gttgcacctt aaatttt
//
last modified: Tue May 31 10:56 2022


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