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LOCUS AF085108 297 bp RNA linear VRL 13-APR-2001
DEFINITION HIV-1 isolate PCCPROT23 from USA, protease (pol) gene, partial cds
ACCESSION AF085108
VERSION AF085108.1 GI:6179763
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Zolopa,A.R., Shafer,R.W., Warford,A., Montoya,J.G., Hsu,P.,
Katzenstein,D., Merigan,T.C. and Efron,B.
TITLE HIV-1 genotypic resistance patterns predict response to
saquinavir-ritonavir therapy in patients in whom previous protease
inhibitor therapy had failed
JOURNAL Ann. Intern. Med. 131 (11), 813-821 (1999)
PUBMED 10610625
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Shafer,R.W., Zolopa,A.R., Warford,A., Montoya,J.G., Katzenstein,D.,
Hsu,P.T., Merigan,T.C. and Efron,B.
TITLE Direct Submission
JOURNAL Submitted (21-AUG-1998) Division of Infectious Diseases, Stanford
University Medical Center, Room S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="PCCPROT23"
/db_xref="taxon:11676"
/country="USA"
/note="AZT, DDI, D4T, DDC, SQV, IDV"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAF05650.1"
/db_xref="GI:6179817"
/translation="PQITLWQRPIVTIKIGGQLREALLDTGADDTVLEDIDLPGRWKP
KMIVGIGGFTKVRQYDQVPIEICGHKVIGTVLIGPTPANIIGRNLLTQLGCTLNF"
BASE COUNT 108 a 51 c 65 g 73 t
ORIGIN
1 cctcaaatca ctctttggca acgacccatc gtcacaataa agataggggg gcaactaagg
61 gaagctctat tagatacagg agcagatgat acagtattag aagacataga tttaccagga
121 agatggaaac caaaaatgat agtgggaatt ggaggtttta ccaaagtaag acagtatgat
181 caggtaccca tagaaatctg tggacataaa gttataggta cagtattaat aggacctaca
241 cctgccaaca taattggaag aaatctgttg actcagcttg gttgcacctt aaatttt
//
last modified: Tue May 31 10:56 2022