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LOCUS AF056135 540 bp RNA linear VRL 12-JUL-2000
DEFINITION HIV-1 isolate z1226 from Zimbabwe, envelope glycoprotein V3-V5
region (env) pseudogene, partial sequence
ACCESSION AF056135
VERSION AF056135.1 GI:3659665
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 540)
Show all sequences for reference 1
AUTHORS Batra,M., Tien,P.C., Shafer,R.W., Contag,C.H. and Katzenstein,D.A.
TITLE HIV type 1 envelope subtype C sequences from recent seroconverters
in Zimbabwe
JOURNAL AIDS Res. Hum. Retroviruses 16 (10), 973-979 (2000)
PUBMED 10890359
REFERENCE 2 (bases 1 to 540)
Show all sequences for reference 2
AUTHORS Batra,M., Tien,P.C., Shafer,R.W., Contag,C.H. and Katzenstein,D.A.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-1998) Center for AIDS Research, Stanford
University School of Medicine, S-156, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..540
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="z1226"
/db_xref="taxon:11676"
/country="Zimbabwe"
/note="clade C; bulk sequenced reverse transcribed viral
RNA from primary PBMC cultures"
gene <1..>540
/gene="env"
/pseudo="env"
CDS <1..>540
/gene="env"
/note="envelope glycoprotein; V3-V5 region"
/pseudo="envelope glycoprotein; V3-V5 region"
/codon_start="1"
/transl_table="1"
BASE COUNT 205 a 101 c 91 g 143 t
ORIGIN
1 ataattagct ttgaaaattt gacagacaat gccaaaacaa taatagtaca ttttaataac
61 tctgtaacaa ttaagtgtac aagacccagc aataatacaa gaaaaagtat gaggataggg
121 ccaggacaaa cattctatgc aacaggagac ataataggag atataagaca agcacattgt
181 aacattagtg gcagtgtttg gaacagaact ttacaacagg taggaagaaa attaagagaa
241 ctcttcccta ataaaacaat aaaatttaac gcatcctcag ggggggatct agaaattaca
301 acacatagct ttaattgtgg aggaaaattt ttctattgca atacatcagg actgtttaat
361 agtacataca attctaatta tacagaaaat agtccaaacc ccaacatccc gatcaccctc
421 ccatgctgaa taatacaact tattttcatg ttgtgggaag taggacgatc agcgttttcc
481 cctcccctca ttagaagaat cacatgttgt tcatctatca tcggacgact atttacgcgt
//
last modified: Tue May 31 10:56 2022