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LOCUS	    AF047310		     297 bp    RNA     linear	VRL 03-MAY-2004
DEFINITION  HIV-1 patient 2, isolate PT2-1196 from the USA, protease (pol)
	    gene, partial cds
ACCESSION   AF047310
VERSION     AF047310.1 GI:3089456
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Shafer,R.W., Winters,M.A., Palmer,S. and Merigan,T.C.
  TITLE     Multiple concurrent reverse transcriptase and protease mutations
	    and multidrug resistance of HIV-1 isolates from heavily treated
	    patients
  JOURNAL   Ann. Intern. Med. 128 (11), 906-911 (1998)
  PUBMED    9634429
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Shafer,R.W., Winters,M.A., Palmer,S., Merigan,T. and Merigan,T.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-1998) Division of Infectious Diseases, Stanford
	    University Medical Center, Room S-156, Stanford, CA 94301, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="PT2-1196"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="sample taken from patient 2 in November 1996; from
		     plasma; patient 2 had received anti-HIV drug therapy for 7
		     years, including therapy with zidovudine, didanosine,
		     zalcitibine, stavudine, lamivudine, indinavir, ritonavir,
		     and saquinavir"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAC18534.1"
		     /db_xref="GI:3089457"
		     /translation="PQITLWQRPIVTIKIGGQLKEALLDTGADDTVLEEMTLPGKWKP
		     KMIVGIGGFTKVRQYDQVPIEICGYKVIGSVLIGPTPANIIGRNLLTQIGCTLNF"
BASE COUNT	108 a	  49 c	   65 g     75 t
ORIGIN
       1 cctcagatca ctctttggca acgacccatc gtcacaataa agataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgac tttgccagga 
     121 aaatggaaac caaaaatgat agtgggaatt ggaggtttta ccaaagtaag acagtatgat 
     181 caggtaccca tagaaatctg tggatataaa gttataggtt cagtattaat aggacctaca 
     241 cctgccaaca taattggaag aaatctgttg actcagattg gttgcactct aaatttt
//
last modified: Tue May 31 10:56 2022


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