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LOCUS AF047310 297 bp RNA linear VRL 03-MAY-2004
DEFINITION HIV-1 patient 2, isolate PT2-1196 from the USA, protease (pol)
gene, partial cds
ACCESSION AF047310
VERSION AF047310.1 GI:3089456
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Shafer,R.W., Winters,M.A., Palmer,S. and Merigan,T.C.
TITLE Multiple concurrent reverse transcriptase and protease mutations
and multidrug resistance of HIV-1 isolates from heavily treated
patients
JOURNAL Ann. Intern. Med. 128 (11), 906-911 (1998)
PUBMED 9634429
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Shafer,R.W., Winters,M.A., Palmer,S., Merigan,T. and Merigan,T.C.
TITLE Direct Submission
JOURNAL Submitted (09-FEB-1998) Division of Infectious Diseases, Stanford
University Medical Center, Room S-156, Stanford, CA 94301, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="PT2-1196"
/db_xref="taxon:11676"
/country="USA"
/note="sample taken from patient 2 in November 1996; from
plasma; patient 2 had received anti-HIV drug therapy for 7
years, including therapy with zidovudine, didanosine,
zalcitibine, stavudine, lamivudine, indinavir, ritonavir,
and saquinavir"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAC18534.1"
/db_xref="GI:3089457"
/translation="PQITLWQRPIVTIKIGGQLKEALLDTGADDTVLEEMTLPGKWKP
KMIVGIGGFTKVRQYDQVPIEICGYKVIGSVLIGPTPANIIGRNLLTQIGCTLNF"
BASE COUNT 108 a 49 c 65 g 75 t
ORIGIN
1 cctcagatca ctctttggca acgacccatc gtcacaataa agataggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgac tttgccagga
121 aaatggaaac caaaaatgat agtgggaatt ggaggtttta ccaaagtaag acagtatgat
181 caggtaccca tagaaatctg tggatataaa gttataggtt cagtattaat aggacctaca
241 cctgccaaca taattggaag aaatctgttg actcagattg gttgcactct aaatttt
//
last modified: Tue May 31 10:56 2022