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LOCUS	    AF047306		     297 bp   mRNA     linear	VRL 03-MAY-2004
DEFINITION  HIV-1 patient 1, isolate PT1-690CX from the USA, protease (pol)
	    mRNA, partial cds
ACCESSION   AF047306
VERSION     AF047306.1 GI:3089448
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Shafer,R.W., Winters,M.A., Palmer,S. and Merigan,T.C.
  TITLE     Multiple concurrent reverse transcriptase and protease mutations
	    and multidrug resistance of HIV-1 isolates from heavily treated
	    patients
  JOURNAL   Ann. Intern. Med. 128 (11), 906-911 (1998)
  PUBMED    9634429
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Shafer,R.W., Winters,M.A., Palmer,S., Merigan,T. and Merigan,T.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-1998) Division of Infectious Diseases, Stanford
	    University Medical Center, Room S-156, Stanford, CA 94301, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="mRNA"
		     /isolate="PT1-690CX"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="from cultured PBMCs; these were isolated from
		     patient 1 in June 1990; patient 1 had received anti-HIV
		     drug therapy for 9 years, including therapy with
		     zidovudine, didanosine, zalcitibine, stavudine,
		     lamivudine, indinavir, ritonavir, and saquinavir"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAC18530.1"
		     /db_xref="GI:3089449"
		     /translation="PQITLWQRPLVTIKIRGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQIHIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT	108 a	  49 c	   67 g     73 t
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa agatacgggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagatacaca tagaaatctg tggacataaa gctataggta cagtgttagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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