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LOCUS AF047306 297 bp mRNA linear VRL 03-MAY-2004
DEFINITION HIV-1 patient 1, isolate PT1-690CX from the USA, protease (pol)
mRNA, partial cds
ACCESSION AF047306
VERSION AF047306.1 GI:3089448
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Shafer,R.W., Winters,M.A., Palmer,S. and Merigan,T.C.
TITLE Multiple concurrent reverse transcriptase and protease mutations
and multidrug resistance of HIV-1 isolates from heavily treated
patients
JOURNAL Ann. Intern. Med. 128 (11), 906-911 (1998)
PUBMED 9634429
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Shafer,R.W., Winters,M.A., Palmer,S., Merigan,T. and Merigan,T.C.
TITLE Direct Submission
JOURNAL Submitted (09-FEB-1998) Division of Infectious Diseases, Stanford
University Medical Center, Room S-156, Stanford, CA 94301, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="mRNA"
/isolate="PT1-690CX"
/db_xref="taxon:11676"
/country="USA"
/note="from cultured PBMCs; these were isolated from
patient 1 in June 1990; patient 1 had received anti-HIV
drug therapy for 9 years, including therapy with
zidovudine, didanosine, zalcitibine, stavudine,
lamivudine, indinavir, ritonavir, and saquinavir"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAC18530.1"
/db_xref="GI:3089449"
/translation="PQITLWQRPLVTIKIRGQLKEALLDTGADDTVLEEMNLPGRWKP
KMIGGIGGFIKVRQYDQIHIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT 108 a 49 c 67 g 73 t
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa agatacgggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagatacaca tagaaatctg tggacataaa gctataggta cagtgttagt aggacctaca
241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022