HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    AF014096		     258 bp    RNA     linear	VRL 22-DEC-1998
DEFINITION  HIV-1 isolate G016 from Sweden, envelope glycoprotein C2V3 region
	    (env) gene, partial cds
ACCESSION   AF014096
VERSION     AF014096.1 GI:3158062
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 258)
            Show all sequences for reference 1
  AUTHORS   Karlsson,A.C., Lindback,S., Gaines,H. and Sonnerborg,A.
  TITLE     Characterization of the viral population during primary HIV-1
	    infection
  JOURNAL   AIDS 12 (8), 839-847 (1998)
  PUBMED    9631136
REFERENCE   2 (bases 1 to 258)
            Show all sequences for reference 2
  AUTHORS   Karlsson,A., Lindback,S., Johansson,B., Gaines,H. and Sonnerborg,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUL-1997) Huddinge University Hospital, Karolinska
	    Institutet, Clinical Virology, F68, Huddinge S-141 86, Sweden
COMMENT     Sequences are available at 6 and 16 days after onset of acute
	    symptoms.
FEATURES             Location/Qualifiers
     source	     1..258
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="G016"
		     /db_xref="taxon:11676"
		     /note="Patient G, day 16 after onset of symptomatic
		     primary HIV-1 infection subtype B from Sweden"
     gene	     <1..>258
		     /gene="env"
     CDS	     <1..>258
		     /gene="env"
		     /note="C2V3 region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAC97411.1"
		     /db_xref="GI:3158063"
		     /translation="ENFTNNAKVIIVQLNSSVEINCTRPNNNTRRSIPIGPGRAFYAT
		     GNIIGDIRQAHCNISRAKWDNTLQQIAIKLSKQYDNKTIVFN"
BASE COUNT	117 a	  38 c	   44 g     58 t      1 other
ORIGIN
       1 gaaaatttca cgaacaatgc taaagtcata atagtacagc tgaacagttc tgtagaaatt 
      61 aattgtacaa gacccaacaa caatacaaga agaagtatwc ctataggacc agggagagca 
     121 ttttatgcaa caggaaatat aataggagac ataaggcaag cacattgtaa cataagtaga 
     181 gcaaaatggg ataacacttt acagcagata gctataaaat taagcaaaca atatgataat 
     241 aaaacaatag tctttaat
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health