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LOCUS AB475175 183 bp RNA linear VRL 23-MAY-2009
DEFINITION Human immunodeficiency virus 1 gag gene for gag polyprotein,
partial cds, isolate: KI-032, clone: 05, HLA-B44 restricted CTL
epitopes region
ACCESSION AB475175
VERSION AB475175.1 GI:238003550
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1
Show all sequences for reference 1
AUTHORS Kawashima,Y., Pfafferott,K., Frater,J., Matthews,P., Payne,R.,
Addo,M., Gatanaga,H., Fujiwara,M., Hachiya,A., Koizumi,H., Kuse,N.,
Oka,S., Duda,A., Prendergast,A., Crawford,H., Leslie,A., Brumme,Z.,
Brumme,C., Allen,T., Brander,C., Kaslow,R., Tang,J., Hunter,E.,
Allen,S., Mulenga,J., Branch,S., Roach,T., John,M., Mallal,S.,
Ogwu,A., Shapiro,R., Prado,J.G., Fidler,S., Weber,J., Pybus,O.G.,
Klenerman,P., Ndung'u,T., Phillips,R., Heckerman,D.,
Harrigan,P.R., Walker,B.D., Takiguchi,M. and Goulder,P.
TITLE Adaptation of HIV-1 to human leukocyte antigen class I
JOURNAL Nature 458 (7238), 641-645 (2009)
PUBMED 19242411
REFERENCE 2 (bases 1 to 183)
Show all sequences for reference 2
AUTHORS Kawashima,Y., Naruto,T., Gatanaga,H., Hachiya,A., Koizumi,H.,
Kuse,N., Oka,S. and Takiguchi,M.
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2009) Contact:Takuya Naruto Center for AIDS
Research, Kumamoto University, Viral Immunology; 2-2-1 Honjo,
Kumamoto, Kumamoto 860-0811, Japan
FEATURES Location/Qualifiers
source 1..183
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="KI-032"
/db_xref="taxon:11676"
/clone="05"
gene <1..>183
/gene="gag"
CDS <1..>183
/gene="gag"
/note="HLA-B44 restricted CTL epitopes region"
/codon_start="2"
/transl_table="1"
/product="gag polyprotein"
/protein_id="BAH59676.1"
/db_xref="GI:238003551"
/translation="LRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMM
TACQGVGGPGHKARVLA"
BASE COUNT 62 a 36 c 51 g 34 t
ORIGIN
1 tctaagagcc gagcaagctt cacaggaggt aaaaaattgg atgacagaaa ccttgttggt
61 ccaaaatgcg aacccagatt gcaagactat tttaaaagca ttgggaccag cagctacact
121 agaagaaatg atgacagcat gtcagggagt ggggggaccc ggccataaag caagggtctt
181 ggc
//
last modified: Tue May 31 10:56 2022